Thamnophis sirtalis (common garter snake): 106551458
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Entry
106551458 CDS
T06107
Symbol
SBNO2
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch homolog 2
KO
K26273
protein strawberry notch
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106551458 (SBNO2)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106551458 (SBNO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_4
AAA_34
SBNO
Motif
Other DBs
NCBI-GeneID:
106551458
NCBI-ProteinID:
XP_013925041
UniProt:
A0A6I9YLM7
LinkDB
All DBs
Position
Unknown
AA seq
1257 aa
AA seq
DB search
MEVLPPDLGSLEGLQGIENHITATQDIPRLSSIQSQTQVEEEEEGDDDETEELGHTETYA
DYIPSKSRIGKQHPDRVVETSTLSSVPPPDITYVLSLPESIAENGLLSALQLEAIVYACQ
EHENLLPSGQRAGFLIGDGAGVGKGRTVAGIIYENYLKGRKKALWFSVSNDLKYDAERDL
KDIEAPHLPVHALNKVRFFLLSFCFLSLPSHPNPHGEKIEIPSQTQVEEEEEGDDDETEE
LGHTETYADYIPSKSIPSPIQPTGLSSSAGASEPKNMIYMSRLGIWGEGTPFRSFDDFLH
AIEKRGVGAMEIVAMDMKVNGMYIARQLSFSGVTFRIEEIPLDAAYKDVYNKAAKLWAEA
LVVFQKAADLIGLESRKSLWGQFWGAHQRFFKYLCIAAKVRRLVELAKEELSKGKCVVIG
LQSTGEARTREVLDENEGHLNYFVSAAEGVFLSLIQKHFPSTKRKRERGSNNKRKLKQRV
RGLNKVMRTAHDHYNNSSSSDIIKISSESSTESEPGLESDFNSSPESLVEMEDMASRYKP
INGAMCNAQKEMNGLGTPECVENMKQELLSQVKKLGKELPLNTLDELIDYFGGPEKVAEM
TGRKGRVVRRPGGSVVFESRAEQSLSIDHVNLKEKERFMNGDKLVAIISEASSSGISLQA
DRRVKNQKRRVHMTLELPWSADRAIQQFGRTHRSNQVSAPEYIFLISELAGERRFASIVA
KRLESLGALTHGDRRATESRDLSKYNFENKYGIRALDKVLRTIFQQMESKVPVPEIYQEG
DAAFFSEMKQSLLSVGISCKEMRYGFMTMEKDCSITKFLNRILGLEVDKQNLLFQYFNDT
FDYLIERDKKDGKYDMGILDLAPGIDEIYEESKEVFLTPGHPQDGQVVFYKVRLRKRLFW
LPSFGEHLSLSPTPXTNYEHSAPLQFRSNKYISLLAEQTRGKYFTLYKPNIGKQSQLETM
DSLFRKYQPVSPADAEPHWKSTYEFSLKHCNHTARNRNCKVVQERKECFQGTRLRHYYML
CGALLRVWTKIASIMANITNTSYLQIVRLKTKEKKKQVGIKIPENCVHQVLKELKQMDEN
VKQKQKQQQLQAMLGPMMASQPYPQVVPPLDLSQPPVFLSAQPTSLLQDEVWDLTNSPPG
EVLPDFWTHPSPPPPPPNVPLPPAPSQFNFHAPYDSSAALVGSLALGGSPSQHEPLPPTP
ALPLPLADNFSPASLNFRELLEEMMLNSNGLVGENSEQERQSVIQFSGPLSDLYDAS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcttgcctcccgatttgggaagtctagaaggcttacagggaatagaaaaccac
atcactgccactcaggacatccctcgtctttcaagcattcagtcccaaactcaggtagaa
gaggaagaggagggcgacgatgacgaaacagaggaactgggtcacacagagacgtatgcc
gattatatcccttccaaatcgagaattgggaagcagcaccctgaccgggtggtagaaacc
agcacgctttccagcgtccctcctccagatatcacctatgtcctctccctccccgaatcc
attgccgaaaacgggttgctctctgcactgcagctggaagccatcgtttacgcctgccag
gaacacgagaacttgcttcccagtggtcagagagctggattcctgataggagacggagcg
ggcgtagggaaaggccggaccgttgcagggatcatctatgaaaattatctgaagggaagg
aagaaggctctgtggttcagtgtctcaaatgatctgaaatacgatgctgagagggacctg
aaggatattgaagcccctcacctccctgtccatgctttaaacaaggtacgtttttttctt
ctctccttttgcttcctttctcttccctcccaccccaacccccatggggaaaaaattgag
ataccatcccaaactcaggtagaagaggaagaggagggcgacgatgacgaaacagaggaa
ctgggtcacacagagacgtatgccgattatatcccttccaaatcaattccttctcccatc
caacccaccggcctgtcttcttcggcaggtgcctctgagccaaagaatatgatttacatg
agtcggctgggaatatggggagaaggcaccccctttcgctcctttgatgacttcctccac
gccatcgaaaagagaggtgttggggctatggagatcgttgccatggatatgaaagtgaat
gggatgtacatcgctcgacaactcagcttttccggagtcacgttccggatagaagaaatc
ccactggacgcggcatataaggacgtgtacaacaaggcagcgaagctgtgggcagaagcc
ctggtggttttccaaaaggctgcggacctcattggcctggagtcccggaagtctctgtgg
ggtcagttctggggggctcaccagcgcttcttcaagtacctctgcattgctgccaaagtc
cggcgcctggtggagctggccaaggaggagctcagcaagggcaagtgcgtggtgatcggg
ttgcagtcgacgggggaagcccgcacccgggaagtcctggatgagaacgaggggcacctg
aactactttgtctcggcagccgaaggcgtcttcctttcactaattcagaagcactttcct
tcaaccaaacgaaaaagagaaagaggaagtaacaataaaagaaaactgaagcagagagtt
cgaggccttaacaaagtgatgagaaccgcccacgaccactacaacaacagcagcagcagc
gacatcattaagatcagctccgagagcagcaccgaatctgagccgggtttggagagcgat
ttcaattcctctccggagtccctcgtggaaatggaggacatggccagcagatacaagccc
atcaatggtgccatgtgtaacgcccaaaaggagatgaacggattagggactccggaatgc
gtggagaacatgaagcaggaactgctgtctcaagtgaagaaactgggcaaagagctacct
cttaacactttagatgaattgatcgactactttggaggcccggaaaaagtagcagagatg
accgggcggaagggacgagtcgtgcggaggcccggtggctccgtggtgtttgaatcgcga
gctgagcaaagcctttcgatcgaccacgtgaacctcaaggagaaggagcgattcatgaat
ggagacaaactcgtagcaataatctcagaagcctccagctcagggatttctctccaagca
gacagacgggtaaagaatcagaaacggcgggtccacatgacgctggaattgccctggagt
gctgaccgagccatacagcagtttggccgcacacaccgttccaaccaggtctctgctcca
gagtacatttttctcatctccgaactggctggagaacggcggtttgcatctattgtggcg
aaacgcctagaaagccttggtgccttaactcacggtgaccgaagagcgactgaatcccgg
gacctcagcaagtacaactttgagaataagtatggaatcagagcgctcgataaagtcctg
cgcaccatcttccagcagatggagagcaaagtccccgtgccagagatttatcaagaaggg
gatgcggcttttttcagcgaaatgaagcagtccctcctctccgtgggaatctcttgcaag
gagatgcgatacggcttcatgaccatggagaaagactgttccatcaccaagttcctaaat
cgcattttgggcctggaggttgacaaacagaacctgctcttccagtacttcaatgacact
ttcgactacctgatcgagcgggacaagaaagatggcaaatacgacatggggattctggac
ttggctccgggcattgacgaaatctacgaagagagcaaagaggttttcctaacgccaggc
cacccacaggatggccaggtggtcttttacaaggtaagacttcgcaagaggttgttctgg
ttacctagttttggggagcacctctctctctctcccactccctaaactaactacgagcac
tctgcccccctgcagttccgaagcaacaaatatattagcctcctagccgaacagacccgt
gggaaatacttcaccctctacaagcccaacatcgggaagcagagccagctggagaccatg
gacagcctttttagaaagtaccagccggtgtcaccggcggatgctgagccccactggaag
agcacttacgaattctccctgaagcactgcaaccacaccgcaaggaacaggaactgcaag
gttgtccaggaaagaaaggaatgtttccaaggcacgcgtttacggcactattacatgctc
tgcggggctctcttgcgcgtctggaccaaaatcgctagcatcatggctaatatcaccaac
accagctacctgcagatcgtccgcctcaagaccaaagagaagaagaagcaagtggggatc
aagataccggaaaattgtgtccatcaggtgttgaaggagttgaagcagatggacgagaac
gtcaaacagaagcagaagcagcagcagcttcaagccatgttgggccccatgatggccagc
cagccctacccgcaggtcgtcccaccgctggacctcagccagcctccagtatttctctct
gcccagcccacttccttgctgcaggacgaggtctgggatctgaccaacagcccacccggg
gaagtccttcctgacttctggacgcacccatctccgccacctcctccgccgaacgttcca
ctcccccctgccccctcgcagttcaacttccacgcgccctacgacagcagcgcagcgttg
gtgggcagcctggcgctcggcggctccccttcccagcacgaacccttgcccccgacgcca
gccctgcccctccccctggcagacaatttctccccagccagcctgaacttccgggaactc
ttggaggagatgatgctgaactccaacggtttggtgggcgagaacagcgagcaggagcgc
cagagcgtcatccagttcagcggacccctctccgacctctatgatgccagctga
DBGET
integrated database retrieval system
