Thamnophis sirtalis (common garter snake): 106551541
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Entry
106551541 CDS
T06107
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106551541 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106551541 (MID1)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106551541 (MID1)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106551541 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
106551541
NCBI-ProteinID:
XP_013925135
UniProt:
A0A6I9YMZ6
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSQCATNESVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDTNSMSSSEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKTTHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTSLIKRNTELETL
LAKLIQTCQHVEVNASRQESKLMEECDLLIEIIQQRRQIIGTKIKEGKVGRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQSAKNITERVAMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFVVKAINQAGSRNSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVYIDSGR
HYWEVVISGSTWYAIGVSYKSVPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIDPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFSQPVCPTFTVWNKCLTIITGLPIPDHL
DFIEQMP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcagaactgacctgccctatctgtctggagctgtttgaggatcca
ttgctgctgccttgtgctcacagtctctgtttcaactgtgcacatcgcatcttagtctcc
cagtgtgctaccaacgaatcagtggaatctatcaccgccttccagtgccccacttgtcgt
tatgtcatcaccctcagtcaacggggtctagacggattgaagcgcaacgtcacactgcag
aatattatagacagatttcagaaagcttctgtgagcgggcccaattctcccagcgaaact
cgccgagaacgagcttttgacaccaacagcatgtcatcgagtgaaaaagttctctgccag
ttctgtgaccaagatcctgctcaggaggcagtcaagacctgtgtaacttgtgaggtatcc
tattgtgaggagtgcctaaaaacaactcatccaaacaagaagccatttactggacaccgt
ttgattgagcctattcctgactcacatatcagaggattgatgtgtctggagcatgaagat
gagaaagttaacatgtattgtgtgactgatgaccagttaatctgtgccttgtgtaaactg
gttgggaggcatcgtgaccaccaagtggcagctctaagtgaacgctatgacaaattaaag
caaaatttagaaagtaatcttaccagccttatcaaaagaaacactgaactggaaacactt
ttggctaaattaattcaaacttgtcaacatgtagaggtgaatgcgtctcgacaagaatcc
aagctgatggaagaatgtgacctgcttatagaaataatccagcaaagacgtcagataatt
ggaaccaaaatcaaggagggaaaagttgggagactgagaaaactggcccagcagatagcc
aattgcaagcagtgcattgaacgctccacctctctcatctcacaggctgagcaatctttg
aaggagaatgatcatgcacgctttttgcagtcggctaaaaatataactgaaagggttgcc
atggcaactgcatcttcccaggttttaattcccgaaattaatcttaatgacacttttgat
acatttgctctggattttaccagagaaaagaaactgcttgaatgccttgattatctgact
gctccaaatccaccaacaattagagaagagctttgcacagcttcttatgatacaatcaca
gttcactggacttcagatgatgaattcagtgtggtctcctatgagctacagtatactatc
ttcactggacaagctaatgtagttagtctgtgtaattcagccgacagctggatgattgtt
ccaaatatcaaacaaaaccattacacggtgcatggcctgcagagtggcaccaagtacatc
tttgttgttaaggccattaatcaggctggcagccgcaacagtgaacctggaaagctgaag
acaaatagtcagccattcaaactggatcccaaatctgctcatagaaagctaaaagtgtct
cacgataacttgactgtggagcgagatgaaacctcttctaagaagagccacactcctgag
cgttttaccagccaaggcagctatggggtagctggcaatgtgtatattgacagtggacgt
cattactgggaggtggttatcagtggaagtacatggtatgccattggtgtttcttataag
tctgtaccaaaacatgaatggattggaaagaattctgcttcttgggttctttgtcgctgc
aacaatacatgggtggtgagacataacagcaaagaaattccaatagaccctgcaccccat
cttcgccgtgttggcattttgctagactacgacaatggttctttggccttttatgatgcc
ttgaattctctacatctttacacttttgatattacattttcacagcctgtgtgcccaaca
ttcacagtctggaataaatgtttgacaataataacaggccttccaatcccggatcattta
gattttattgagcagatgccgtga
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integrated database retrieval system
