Thamnophis sirtalis (common garter snake): 106551645
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Entry
106551645 CDS
T06107
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106551645 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106551645 (NUP85)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106551645 (NUP85)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106551645 (NUP85)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106551645 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
106551645
NCBI-ProteinID:
XP_013925263
UniProt:
A0A6I9YLL7
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MEELDVVTLIPGVNSDQKQLCFTWGPTEMLVCETLFRPTETKEKTPGCPFVYVVRKDQDV
YSQTLRKLFNESHGIFVGLQKNEKEKAGKSRTAQLVGVSKSYRSVIRACMEDSHQMAISA
RDPAMHMHYSTQVSVLSAMELIWNLCEIMFIEAAPAGLVLCHLLDWVRLHVCEIDNMVCE
VLRSENPAKHEHFWNVVTGYVLQGRMDEARQLLSKEASTNPTSVHMCKVLDELMKKMPVL
SPSSNQTLTEMELKWQHWHEECERFLKDGTFASNSHMEVLCKILLGDENAILEKKELMTT
WYHFLVTRLLYCHPTVKHVELHLYAQSSLDMFLGGESSPEPLDSILLAAFEFDIHQVIKE
CSIALSNWWFVAHLTDLLNHCNLLQSHNLYFGSNMREYLLLEYASGLFAHHSLWQLAVDY
FDYCPEYGKAYLEHHIERISLDTEHKALKVLRICEQRTMTEQVRSICKIMSMKAVRNNRL
GSALSWSIRAKDAAFATLISDRFLREYCERGTFSDLDLIDNLGPSMLLSDRLTFLGKYRE
FHRMYGEKKFFAAAKLLLMLMTARIAPCSFWMTLLTDALPLLEHKEVIFSADQTYELMKC
LEDVMAAEPKKEKLQDDDAEIMKVEMLRLALARNLARAIIKEGTLEES
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttggatgtggtcacgcttattccaggagtgaactctgaccagaagcagtta
tgctttacatggggacccacagagatgttggtgtgtgaaaccttgtttaggccaacagag
actaaagagaagactccaggttgtccttttgtctatgtagtacgcaaagatcaagatgtt
tattctcagactttgcggaagcttttcaatgaatcacatgggatctttgttgggctacag
aagaatgagaaagaaaaggctggaaagtcaagaactgcacaattggttggagtaagcaaa
agctatcgatccgttataagagcctgcatggaagattcacatcagatggctatatctgca
cgggatcctgcaatgcacatgcactacagtactcaggtctctgttttgtccgcaatggag
ttgatctggaatctgtgtgaaatcatgtttattgaagctgctccagcgggtttggtgtta
tgtcacctgctcgattgggtccgtcttcatgtgtgtgaaatagataacatggtttgcgaa
gttctgaggagtgagaatccagcaaaacatgaacatttctggaatgtggtaactggttat
gtgcttcagggtagaatggatgaggctcggcaattactttctaaagaagctagtaccaat
cccacttcagtgcacatgtgcaaagttttagatgagctgatgaagaagatgcctgttctt
agtcctagcagtaaccagactttgacagagatggagttaaaatggcagcactggcatgag
gaatgtgagaggtttctgaaagatggaacatttgcttctaattctcacatggaagttctc
tgtaagatcctacttggagatgagaatgctattttggaaaagaaagagctaatgacaacc
tggtatcattttcttgtgacccggctattatattgtcatcctaccgtgaagcacgtggaa
ctccatctttatgcacagtccagcctggacatgtttctgggaggagaaagcagcccagaa
ccattagacagcatcttattggcagcttttgaatttgatatccaccaagtgattaaagaa
tgcagcattgccttgagcaactggtggtttgtagctcatctgacagatctcttgaaccat
tgcaatctactccagtcccacaatctttactttggttccaatatgcgtgaatacctcctg
ctagaatatgcttctgggctctttgcccatcatagcttatggcaacttgcagttgactat
tttgactattgtccagaatatggtaaagcatacctggagcatcatattgaacggatttcc
ttggatacggagcataaagccctgaaagtactgaggatttgtgaacagagaacgatgact
gaacaagttcgtagcatctgtaaaatcatgtccatgaaggctgtcaggaacaatcggctt
ggctcagcactatcctggagcatccgagccaaagatgctgcttttgctaccctcatatca
gacagatttttgagagaatattgtgaaagaggtactttctcagacttggacctcattgac
aacttgggtccatccatgttgcttagcgatcgactaacgtttcttggaaagtaccgggaa
tttcatcgcatgtatggggagaagaagttctttgcagcagccaaactgttactaatgctg
atgacagctcgtattgctccttgctccttctggatgactttgttgactgatgcacttcct
ctcctagaacataaagaggttatattttctgctgatcagacatatgaattgatgaaatgc
ttagaagatgtgatggcagcagagccaaaaaaagagaaactccaggatgatgatgcagag
ataatgaaggtggaaatgctaagacttgctctggcaagaaacttagcaagagctatcatt
aaagagggcacactggaagaatcatga
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