Thamnophis sirtalis (common garter snake): 106551755
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Entry
106551755 CDS
T06107
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106551755 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106551755 (TAF6)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106551755 (TAF6)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106551755 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
106551755 (TAF6)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106551755 (TAF6)
STAGA complex
106551755 (TAF6)
TFTC complex
106551755 (TAF6)
SAGA complex
106551755 (TAF6)
SLIK complex
106551755 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
106551755
NCBI-ProteinID:
XP_013925377
UniProt:
A0A6I9YMB9
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MAEEKKPKVGSAQLPTESMKVVAESVGIGQVPEETCQLLADEVSYRIKEIAQDALKFMRM
GKRQLLTMGDVDLALKLKNVEPLYGFHTQEFIPFRYASGGGRELYFYEEKEMDLSDIINT
PLPRVPLDVCLKAHWLSIEGVQPAIPENPPPAPKEQQKAEATEPLKAAKPGQEEEGALKG
KGQSATPADSKGKEKKGPLLEGAPLKLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAE
ALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYL
HEIIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLIAQICKNFSTTTNNIQSRITKTFTK
SWVDEKTPWTTRYGSIAGLAELGPDVIKTLILPRLQVEGERVRSVLEGPVVSNIDKIGAD
HVQSLLLKHCAPVLAKLRPPPDNQEAYRAEYGALGPLLCTNVVKARAQAAVQAQQVNRTT
LTITQPRPTLTLSQAAQGGSSATRAPSIIKVPGSITLPVQTLVSTRPATPTQPSPPPTKF
IVMSSASGTSTSQQVFTLSGGPASTSTSPVTSTVPSTQPLVKLVSGGQAAPSPPISGSVQ
KYIVVSLPPATEGKGGPSQLSPSSSVPPSLGLAGGPLKQERSNSPQLPGGASTTTNATAF
LTKATNGGQGLVPESPQPPL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagaagaagccgaaggtgggcagcgcgcagctccccaccgagtccatgaag
gtggtggccgagtcggtgggcatcggacaggtgcccgaggagacgtgccagctgctggcg
gacgaggtcagctaccgcatcaaggagatcgcgcaggacgcgctgaagttcatgcggatg
gggaagcggcagctgctgaccatgggcgacgtcgacctggccctgaagctgaagaacgtg
gagccgctctacgggttccacacgcaggagttcatccccttccgctacgccagcggggga
ggccgcgagctctacttctacgaggagaaggagatggacctgagcgacatcatcaacacg
cccctcccccgcgtccccctcgacgtctgcctcaaggcccactggctgagcatcgaggga
gtccaaccggcaatcccagaaaatccacccccggcccccaaggagcagcagaaagccgag
gccaccgagcctttgaaggcagccaagccgggccaggaggaggagggggctctcaagggc
aaaggacagagcgccactcccgccgatagcaaaggcaaagagaagaaggggccccttctg
gaaggagcccccctgaagctgaagccacgcagcatccacgagctctcggtggagcaacag
ctgtactacaaggagatcaccgaagcctgcgtgggatcttgtgaagcaaagcgagcggaa
gccctccaaagcatcgccacagaccccggcctctaccagatgttgccccgattcagcaca
ttcatttccgaaggggtgcgggtcaacgtggtgcagaacaacctggccctcctgatctac
ctcatgcggatggtcaaggctctgatggacaaccccaccctctatctggagaaatacctg
catgagatcatcccagccgtcatgacctgcatcgtcagccgccagctctgcctcaggcca
gatgttgacaaccactgggccctgcgagactttgccgctcggctcatcgcccaaatctgc
aagaatttcagcaccaccacgaacaacatccagtcgcgcatcaccaaaaccttcaccaag
agctgggtggacgagaagacgccctggaccacgcggtacggatccatcgctggcctggcg
gagctgggtcctgacgtcatcaagaccctcatcctgccgcggctgcaggtggagggggag
cgtgtccgcagcgtcctggaaggccccgtggtcagcaacattgacaagattggggctgac
catgtccagagcctcctgctgaagcactgtgcccccgtcttagccaagctgcgtcccccg
ccggataaccaggaggcctatcgagcggagtacggcgccttgggccccctgctctgcacc
aacgtggtgaaggcacgggcccaggcggccgtgcaggctcagcaggtgaaccgcaccaca
ctgaccatcacccagccccggccgacactgaccctctcccaggcagcccaggggggcagc
agcgccacccgggcgcccagcatcatcaaggtgcccggctccatcaccctccctgtgcag
accctggtctcaacccggccggccaccccaacgcagccctcgcctccgcccaccaagttc
atcgtcatgtcttccgcctccggcacctccacttcccagcaggtgttcactctcagcggt
ggcccagccagcacctccacctcgcccgtcaccagcacggtgcccagcacgcagcccctt
gtgaagttggtttccggtgggcaggcagcccccagcccccccatctctggcagcgtccag
aagtacattgtggtttctctgccccctgccacggagggcaaagggggcccctcccagctc
tccccctcatcctccgttccgcccagcctgggactcgccggcggacccctcaagcaggaa
cgcagcaacagcccccagctgccaggcggtgccagcaccaccaccaacgccaccgctttc
ctcaccaaagccaccaatgggggccaaggcttggtgcccgagtccccacagccccccctc
tag
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integrated database retrieval system
