Thamnophis sirtalis (common garter snake): 106551777
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Entry
106551777 CDS
T06107
Symbol
XPO1
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03008
Ribosome biogenesis in eukaryotes
tsr03013
Nucleocytoplasmic transport
tsr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106551777 (XPO1)
03008 Ribosome biogenesis in eukaryotes
106551777 (XPO1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106551777 (XPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106551777 (XPO1)
03009 Ribosome biogenesis [BR:
tsr03009
]
106551777 (XPO1)
03016 Transfer RNA biogenesis [BR:
tsr03016
]
106551777 (XPO1)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106551777 (XPO1)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106551777 (XPO1)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
106551777 (XPO1)
Pre-60S particles
106551777 (XPO1)
Transfer RNA biogenesis [BR:
tsr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106551777 (XPO1)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106551777 (XPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
BspA_v
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
106551777
NCBI-ProteinID:
XP_013925405
UniProt:
A0A6I9YME9
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQIFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGTQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDSETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
PLNPGNPVNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagcacggcagctgctggatttcaac
cagaagttggatataaatctgttggataatgtggtgaactgcctgtatcatggagaagga
gcccagcaaaggatggcacaggaagtcttgactcacttaaaggaacaccctgatgcatgg
acaagagttgatactattctggaattctctcagaatatgaacaccaaatattatggcctg
cagatcttggaaaatgtgataaaaacaaggtggaagatccttccaagaaaccaatgtgaa
ggtatcaaaaagtatgttgttggcttaattatcaagacctcctctgatccaacatgtgtt
gaaaaagagaaagtatacattgggaaattgaacatgattcttgttcagatactaaaacaa
gaatggccaaaacattggccaacattcatcagtgatattgttggggccagcagaacaagt
gaaagcctttgccagaacaacatggtcatcttgaagctattgagtgaagaagtctttgat
ttttccagtggacagataactcaagtgaaagccaaacatttaaaggacagcatgtgcaat
gaattctcacagatatttcagctatgtcaatttgtgatggagaactctcaaaatgctcct
cttgttcatgcgacattggaaactttacttcgatttctcaactggattccactgggctat
atttttgagaccaaattgatcagtacattaatatacaaatttttaaatgttcctatgttc
cgaaatgtttctttgaagtgcctaacagaaattgctggtgtcagtgtgagtcagtatgag
gaacaatttgtcacactctttactttaaccatgatgcagttgaaacagatgcttcctttg
aacaccaatatacgactggcatattccaatggaaaagatgatgaacagattttcattcag
aatctcagcttgtttctctgtacctttttaaaagagcacggtcaacttatagaaaaacgt
ttaaatctcagagagacgttaatggaagctctccattacatgttgctggtatctgaagta
gaagaaactgaaatcttcaagatttgtctggagtattggaatcatctggctgctgaatta
tatagagagagtccattttcaacatcagcttctccattgctatctggaactcagcatttt
gatgttcctccccggagacaattgtatttgcctgtgctgtctaaggtgcgattattgatg
gttagccgcatggcaaaaccagaagaagtacttgttgtagaaaatgatcaaggagaagtt
gttcgagaatttatgaaagatacagactctatcaacttgtacaagaacatgagagaaaca
ttagtttatcttacccatctggattatgcagataccgaacgaataatgacagagaagctt
cacaatcaagtaaatggtactgaatggtcatggaaaaatctcaataccctgtgttgggct
ataggttcaataagtggagcaatgcatgaagaagatgagaagaggtttcttgtaacagta
ataaaggatcttcttggactctgtgagcaaaaaagaggaaaagataataaagccattatt
gcatcaaatataatgtacatagtaggacaatatccaagatttttgagagcccactggaaa
tttctgaagactgttgtcaacaagctatttgaatttatgcatgaaactcatgatggggtc
caggacatggcttgtgatacttttataaaaatagcgcaaaaatgtcgaaggcactttgtt
caagttcaagttggagaagtaatgccattcattgatgagatcctgaacaatattaacaca
attatttgtgatcttcagccacagcaggtgcatacgttttatgaagcagttggatatatg
attggtgctcaaactgaccagacagtacaagagcatttgatagagaaatatatgttactc
cctaatcaagtatgggacagcataattcaacaagctacaaaaaatgttgatattcttaaa
gactctgaaacagttaagcagttggggagtatcctgaaaactaatgtgagggcatgtaaa
gctgttggacatccatttgtaattcagcttggaagaatttacttagatatgctgaatgtg
tataagtgcctaagtgaaaacatttctgcagctattcaagcaaatggtgaaatggtaaca
aagcaacctctgattagaagtatgagaacagtaaaaagggaaactttaaaactcatttct
ggttgggtgagcagatctaatgatcctcagatggtagctgaaaactttgttccacctttg
ctggatgcagttcttattgattaccagaggaatgttccagctgccagagagccagaagtg
cttagtacaatggctatcatagtaaacaaattgggggggcacattactgctgaaatacct
cagatatttgatgctgtttttgaatgcacattgaatatgattaataaggattttgaagag
taccctgaacacagaacaaacttttttttattactacaagcagtaaactcccattgcttt
ccagcgttcctggctattccacctgcacagttcaagctagtattggattctatcatttgg
gctttcaagcatacaatgagaaatgttgcagatacaggccttcagatcctttatacactt
ttacaaaatgttgcacaagaagaagctgctgcccagagcttttatcaaacttatttctgt
gacattcttcagcacattttttctgttgtaacagacacatctcatactgctggtttgacg
atgcatgcatcaattcttgcatacatgttcaacttagtagaagaaggaaaaataagtact
cctttaaaccctggaaatccagtaaacaaccaaatgtttattcaggagtatgttgctaat
cttcttaaatctgcatttcctcatctacaagatgcacaggttaaactgtttgtaacagga
ctcttcagtttaaatcaggatattcctgctttcaaggaacaccttcgggacttcctagta
caaataaaggaatttgcaggtgaagacacatctgacttattcctggaagaaagagagaca
gctcttcgacaggctcaggaggaaaaacacaaacttcagatgtctgtccctggcatcctt
aatccacatgaaattcctgaggaaatgtgtgattaa
DBGET
integrated database retrieval system
