Thamnophis sirtalis (common garter snake): 106551809
Help
Entry
106551809 CDS
T06107
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106551809 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106551809 (ATRX)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106551809 (ATRX)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
106551809 (ATRX)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106551809 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106551809
NCBI-ProteinID:
XP_013925443
UniProt:
A0A6I9YM23
LinkDB
All DBs
Position
Unknown
AA seq
2252 aa
AA seq
DB search
MKSLPKGTIVVQPEPVLNEDKDDFKGPEFRNRNSSKLKPEAQKKRGEEGLHGIVSCTACG
QQVNHFQKDSIYRHPTLKVLICKTCFKYYMSDDISRDADGMDEQCRWCAEGGNLICCDFC
HNAFCKKCILRNLGRKELSTIMDENNQWHCYICQPEPLLDLVTACDSVFENLEQLLQQNK
KRIRVDSDKNKMYDNSLKYSSKKNSSNCNGEEKKFDHPYSGALTYSYKALMVPKVLLKKT
KKLAETTTNMNASFIKFLKEASENSEINRTVHIRQLKAFKSVLNDIKKTHAALEEGLNLE
IQTLGVKFKPKHNKEKETEIKTTNNSEMKTTEGKEFKETKIISEVSEPSGDQSVPVTEQT
GNKKLNCKDKKSGKSEELEYKPNNLEATDMEIVSVPSSVPEDIFESCMDVQKAGGQSIAN
RTEHGSGNTNKSKDSKGGTKLVHSPKVKKELVVKLTPVSISSSPVKPEDLDEKLEKGEDQ
EDGKENCSSECMPEKDLLSQVEDLRRSPRVKTTPLRRPTDINTLTSNSEEDSNEPYDEKY
SRKTTQSKRKKDKETSPSGPVCSPQSNKELAIDHSSDSDEMPAVLQEAAMMSQNSSDADS
SNEVSKDVLNTLKKRVKEENGKRKRKSSSSGSDFDAKKGNSNKDLGAAKKKRQNCSDSSN
NDSELERENIIKTEQTKKPAKETPKKDSYISAEEELPKQEMGESNQKQQNELTSEVSGFL
ISDKEKAGSSLEDTPGKETSVKEKQGQNVKESALKGRQNVSTRKDNSITSGKQSKPQGKL
RSLSSDDAGRSPKQEQSGESSDEIKKAKKEKSTNGRKTSERRQSDSCSEIEKPSPEKESC
SASGSSSKNQKTPEGKTGRNLRGRTSKKRQDNVSDAEKSPPNEVAGDPLEDNLNRKGEKA
KEKKKNPKRRDSKKPRGESLSSSDEDFYEEKKNKKRGTAKKGSGKGPCKEKGKREFKKTK
DTSVSAAATSSSSNEAENENLNSAGDESSDEQKIKPVTESLVVNRKLGIFQSSGDEGEHQ
SAAVAMEEEEDDDDAENRIAKKMLLEEIKANLSSEEDASSDEESNDGKKKKGGRAKNKNN
SGENEQEDEFDSDSDAEEAKKPRYRHRLLRHKLTMSDGESEEEKKGKSKEAKDVKRRNRR
KVSSEDSSSSEAYESGISEEVSESEDDQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQE
DSSSENDKSNSEDDDNDDSKSPGKGRKKIRRIIKDDKLRTETQNALKEEEERRKRIAERE
REREKLREVIELEDASSKCPITTKLVLDEDEETKEPLVQVHQSIVTKLKPHQVDGVQFMW
DCCCESLKKTKKSSGSGCILAHCMGLGKTLQVVSFLHTILLCDKLDFRTALVVCPLNTAL
NWVNEFEKWQEGLEDDEKLEVSELATVKRPQERSYILQRWQDEGGVMIIGYEMYRNLAQG
RNVKSRKLKEIFNKALVDPGPDFVICDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQ
NNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTPVDVRVMKKRAHILYEMLA
GCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGRGKAGAKL
FQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLDDFIVSDSEETSMSLSSEEDTKKKK
TKGKKSKKGSNSSGSGSDNDVEVIKVWNSRSRGGGEGTVEEPINNPPIILKTEEGKSTSS
NPGSPAPDWYKDFVVDADAEVLEHSGKMMLLFEILRMAEELGDKVLVFSQSLISLDLIED
FLELANRDKEEEDEEGKKKPIIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEDFNDVTNV
RGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQ
GTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPSSEKKKKRDT
PMLPKDTILAELLQIQKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMR
INMPAGQNMFQPNFTTQSPYMPFNLAALSTMSNQQLEDLINQGREKVAEATNNVTGARIQ
PIEDIISSIWKENLTLTETQVQALALNRQAGQELDVKRREAIYNDVLTKQQMLISCVQRI
LMNRRLQQQFSQQQLPQQLPQQHPQLSYQQAAMSHLMGKPLPGLIMNPSNFQQIDLRGMY
QSAAGALHPPPLQRAPPPMSGKNPGPSQGKTM
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtttgccaaaaggaactattgttgtacaaccagagccagtacttaatgaagac
aaagatgactttaaaggacctgaatttaggaacagaaattcttctaaactaaaaccagaa
gctcagaagaagcgaggagaggaaggacttcatggaattgttagctgtacagcttgtggt
cagcaggtgaatcattttcaaaaagattctatctacagacatccaacattgaaagttctt
atatgtaagacttgcttcaaatattacatgagtgatgacatcagccgtgatgcagatgga
atggatgaacagtgtagatggtgtgctgaaggtggaaacttaatttgctgtgacttttgc
cataacgcattctgcaaaaaatgtatattgcgcaatttaggccgaaaggagctgtcaact
ataatggatgaaaataatcaatggcattgctatatttgtcaaccagaacctttgctggac
ttggtcactgcttgtgatagtgtatttgaaaatttggaacaattattacagcaaaataag
aagagaatccgagtcgacagtgataaaaataaaatgtatgataattcccttaaatattct
tcaaagaaaaatagttcgaattgtaatggagaagaaaagaaatttgatcatccatattct
ggggctctaacttattcttataaagcattaatggtgccaaaagtactgctgaaaaaaaca
aaaaagcttgctgaaaccacaactaacatgaatgctagttttataaagtttctcaaggag
gcaagtgaaaattctgaaataaacagaacagtacatatacgtcagctgaaagcttttaag
tctgtgttaaatgacattaaaaagactcatgcagctttggaggaaggtctgaatctagag
attcaaactctgggtgttaaattcaaaccgaaacataacaaagagaaagaaacagaaatt
aaaacaactaacaacagtgaaatgaaaacaacagaaggaaaagaattcaaagaaactaaa
attatatcggaagtcagtgagccttccggtgatcaaagtgtgccagtaacagaacagacg
ggcaacaaaaaattaaactgtaaagataaaaagtctggcaaaagtgaagagcttgaatat
aaacctaataaccttgaagcaacagatatggaaattgtttctgttccctcatctgttcct
gaggatatttttgaatcctgtatggatgtgcagaaagcaggtggacagagtattgcaaac
cgaacagaacatggttcaggaaatactaataaatctaaagatagtaaaggtgggactaag
ttggtacattctcccaaagttaagaaggagttggttgtaaaattgacacccgtttccatc
tcttcttctcctgtgaaacccgaggatctagatgaaaaactggaaaagggagaggaccaa
gaagatggaaaagaaaattgtagttctgaatgcatgccagaaaaagatctcctttcacag
gtagaagatctcagaaggtctccacgagttaaaactacacctttaaggcgtccaacagac
ataaataccttaacttcgaattctgaggaagatagtaatgaaccatatgatgaaaagtat
agcagaaaaaccacacagtccaaaaggaaaaaagacaaggagacttctccgagtggcccc
gtttgcagtcctcagtcaaacaaagagcttgctatagaccacagttctgattctgatgaa
atgcctgctgttctccaagaggcagccatgatgagtcagaattcttcagatgctgatagc
agcaatgaagtatccaaagatgtgctaaatacattaaagaagagggtgaaggaggagaat
ggaaaacgaaaaaggaaaagttctagttctggttcagattttgatgctaaaaaaggtaat
tcaaataaagatttaggtgctgctaaaaagaaacgtcagaactgctcagattcttctaat
aatgattctgaattagaaagagaaaatatcataaaaacagagcaaacaaagaaacctgca
aaagaaacgccaaagaaagacagttacatttctgcggaagaggaattacctaaacaagaa
atgggagaatcaaaccagaaacagcaaaatgaattgaccagtgaagttagtggattttta
atttcagacaaggagaaggcaggcagctctttggaagacacacctggtaaagagacctct
gtgaaagaaaagcaggggcaaaatgtcaaagaaagcgcgttgaaaggaagacagaatgtt
tccactagaaaagacaatagcatcacttcaggcaagcaaagcaagccacaggggaagcta
cggagtttatcttccgatgatgcaggacggtccccaaagcaagaacaaagtggcgagtcc
tcagatgagatcaagaaagccaaaaaagaaaaaagcacaaatgggagaaagacctctgaa
aggaggcaaagtgattcctgttctgaaattgaaaagccttctccggaaaaagaaagctgc
agtgcttctggaagtagcagtaaaaaccaaaaaacacctgaaggaaaaacaggaaggaac
ttaagagggagaacttctaagaaacgccaagataatgtttcagacgctgagaagtctccc
ccaaatgaagtggccggtgatcctttggaagacaatttaaatagaaagggagagaaagct
aaagaaaagaagaaaaaccctaaaaggagggattcaaaaaaaccgagaggggagtctctg
tcttcttccgatgaagacttctatgaggagaaaaagaacaaaaagagagggacagccaag
aagggaagtggcaaaggtccctgtaaagagaaagggaaacgcgaatttaaaaaaaccaag
gacacatcggtcagtgctgctgccacttcatcctcatcaaatgaagctgaaaatgaaaat
ttgaattcagcaggtgatgaaagcagcgatgagcagaaaataaagccagtaacagagagt
ttggtggtgaacagaaaactgggaatttttcagtcttcaggagatgaaggagagcatcaa
tctgcagctgtggcaatggaagaagaggaagatgacgacgacgcggagaatagaattgcc
aagaaaatgcttttagaagaaatcaaagccaatctttcctcagaggaggatgcttcttct
gatgaagaatccaatgatgggaagaaaaagaaaggagggcgagccaaaaacaaaaacaac
agtggagagaatgaacaagaagatgagtttgactcggattcagatgctgaagaggccaag
aaacctagatacaggcaccgtttgttaagacataaattaacaatgagtgatggagagtcc
gaggaagagaaaaagggaaaatctaaagaggcaaaagacgttaaacgcagaaataggagg
aaggtgagcagtgaggattccagtagttcagaagcctatgaatctggtattagtgaagaa
gtgagtgaatctgaagatgatcaacgtcctagaacgaggtccgccaagaaagcagaatta
gaagaaaaccagaggagttacaaacagaagaaaaaaaggagacgcataaaagtccaggaa
gattcatctagtgaaaacgataagagcaatagtgaagatgatgataatgatgattctaaa
tctcccggaaaaggcaggaaaaaaataaggaggattattaaagatgataaactcagaaca
gaaacgcaaaatgccttgaaagaagaagaggagagaagaaaacggattgcagaaagggag
cgtgaaagggagaagctcagagaagtaatagaactagaagatgcatcgtcgaaatgtcca
attacaactaagctggttttagatgaagatgaagaaaccaaagaaccattagtgcaagtt
catcaaagcatagtgacaaaacttaaacctcatcaagtagatggtgttcagtttatgtgg
gattgctgttgtgaatctctgaaaaaaaccaagaaatcttcaggctctggatgtattctg
gcgcactgtatgggtttgggaaagaccttgcaggtagttagtttccttcataccattttg
ctttgcgacaaactggatttcagaactgcccttgttgtgtgtccattgaacacagccctc
aactgggtgaatgaatttgaaaaatggcaagaaggcctagaagacgatgagaaacttgag
gtctctgaactagcaacagtgaaacgccctcaagagaggagctacattttgcaaaggtgg
caggatgaaggaggtgtcatgatcataggctatgaaatgtatcgtaaccttgcacaaggg
aggaatgtgaagagcagaaaactgaaggaaatatttaacaaagcattggttgatcctggc
ccagattttgttatctgtgatgaaggacatatactgaaaaatgaagcttctgctgtttct
aaagctatgaattctatcagatccaggagaaggataattcttacaggaacccctttgcaa
aacaatctcatagaatatcactgcatggttaatttcatcaaggagaatttacttggatca
gttaaggagttccgaaatcgatttataaaccccatccagaacggccagtgtgctgactcc
actccagtagatgtgagagtgatgaaaaagcgggcacatatcttgtatgaaatgctagct
ggatgtgttcagaggaaagattatacagcattgaccaagttcctgccaccaaaacacgag
tatgtcctagctgttagaatgactcccattcagtgtaaactataccagtactacctggat
cacttaacaggtgtcggcaacagcagcgaaggtggaagaggcaaagctggagctaaactc
ttccaagatttccagatgttaagcagaatttggactcatccttggtgtttgcagctggat
tatattagcaaggaaaataagggttatttcgatgaagacagtcttgatgacttcatagtt
tctgattctgaagaaacatcaatgagcttaagctctgaggaagatactaaaaagaagaaa
acaaagggcaagaaatccaagaaaggtagtaattccagtgggagtgggagtgacaatgat
gtagaagtgattaaagtctggaattcgagatctcggggaggtggagaaggaacggtagaa
gagccaatcaacaatcctcccatcattttaaagacagaggaaggtaaaagtacttcctcc
aatcctggcagccctgcccctgattggtataaggattttgtggttgatgctgatgcggaa
gtgctggagcattcagggaagatgatgctcctctttgaaatcctgcgcatggccgaagaa
cttggtgataaagtcttagtcttcagccaatctttaatatcccttgacttgatagaagat
tttctggagttagcaaaccgggacaaagaagaagaagacgaagaagggaagaaaaagcca
ataatatataaaggtgaagggaaatggttcagaaatattgattattatcgtttggatggt
tctactactgctcagtcaagaaaaaagtgggctgaagattttaatgatgtaaccaatgtc
agaggccgcttgtttattatttctactaaagcaggatcccttggtataaacctagtagca
gcaaatagagtcattatttttgatgcttcttggaacccatcttacgatattcagagtatc
ttcagagtgtatcgttttgggcaaactaaaccagtatatgtttaccgatttttagctcag
ggaaccatggaagacaagatctatgatagacaggtaacaaaacaatcgctgtctttccga
gtggttgatcagcaacaggttgaacgccattttaccatgaatgaactcacagaactctac
acctttgaaccagacttactggatgatcccagttcagaaaagaagaagaaaagagacacg
cccatgttacccaaagacacaattctagctgaactgttacagattcagaaagaacatata
gtgggttatcatgagcatgattcccttctggaccacaaagaggaagaagaattgactgaa
gaagaaaggaaggcagcttgggctgaatatgaagctgaaaagaagggtctgacaatgcgc
atcaacatgccagcggggcaaaacatgttccagcccaatttcacaactcagtctccgtat
atgcctttcaacttggcggccttgtctacgatgagcaaccagcaattggaggacctcatt
aatcaaggcagggaaaaagttgcggaagcaacgaacaatgttactggagcaagaattcaa
cccattgaagacattatttcctctatatggaaggagaatctgaccctgacagagacgcag
gtccaggctttggctctgaaccgtcaggcaggtcaagagctggacgtgaagcgccgggag
gctatttataacgatgtcttgaccaagcagcaaatgctcatcagctgcgtccagaggatc
ctgatgaaccggcggctgcaacagcaattcagtcagcagcaactcccgcagcagctcccg
cagcagcacccacagctctcctaccagcaggcagccatgagccacttgatgggcaagccc
ctcccgggcttgataatgaacccctccaacttccagcagatcgacctccgaggaatgtac
cagtctgccgctggggccctgcaccccccgcccctgcagcgagcgcctcccccgatgagt
ggcaaaaacccaggaccctcccaagggaaaacgatgtga
DBGET
integrated database retrieval system
