Thamnophis sirtalis (common garter snake): 106551812
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Entry
106551812 CDS
T06107
Symbol
PDGFD
Name
(RefSeq) platelet-derived growth factor D
KO
K05450
platelet derived growth factor C/D
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04010
MAPK signaling pathway
tsr04020
Calcium signaling pathway
tsr04510
Focal adhesion
tsr04518
Integrin signaling
tsr04540
Gap junction
tsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106551812 (PDGFD)
04020 Calcium signaling pathway
106551812 (PDGFD)
09133 Signaling molecules and interaction
04518 Integrin signaling
106551812 (PDGFD)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106551812 (PDGFD)
04540 Gap junction
106551812 (PDGFD)
09142 Cell motility
04810 Regulation of actin cytoskeleton
106551812 (PDGFD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tsr04052
]
106551812 (PDGFD)
Cytokines and neuropeptides [BR:
tsr04052
]
Cytokines
Growth factors (RTK binding)
106551812 (PDGFD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
106551812
NCBI-ProteinID:
XP_013925442
UniProt:
A0A6I9YMI3
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MQMLAPLLLYVVAWATFCPQQQGSAAGSQSGSIRALRASNRRRDESNHLSALYKKEETIN
VWENGYIQSPRFPHNYPRNLLLTWKLRSPGNARIQLVFDHQFGLEEPENDICRYDFVEVE
DISEISTLIRGRWCGYKETPPKITSKTNQLKITFKSDDFFVAKPGFKIYYSLVDDLQPVA
SETNWESVTSPVLGISYRSPSVTDPTLTVEALDETVAGFDTVEELLKHFNPETWREDLDH
LYTESAPPRGRSFYERKSKVDLDRLNDEAKRYSCTPRNYSVNVREELKQSNAVFFPRCLL
VQRCGGNCGCGTTNGKCACTAGKLVKKYHEVLRFIPEAGHLRRRGKTKHNMSLIDIQLEH
HERCDCVCSARPPR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgctagcgccgctcctcctttacgtggtagcctgggccactttttgcccccag
cagcagggatccgccgccggcagccagagcgggtctatcagagccttgcgcgcctcgaac
cggcggcgagatgaaagtaatcatctctcagccttatataagaaagaagagaccatcaat
gtttgggaaaatggttacatccagagccctcgtttcccacacaattaccctagaaatctg
ttgctgacatggaagctacgttcaccaggaaatgccagaatacagctggtgtttgatcat
cagtttggactggaggaaccagagaacgatatctgcagatatgattttgtggaagtggag
gatatttccgaaattagcactctcatccgaggacgttggtgtggatataaagaaactcct
cccaaaataacatcaaagacaaaccagctgaagatcaccttcaaatcagatgacttcttt
gtggctaaaccaggattcaagatttactactccctggtggatgatcttcagcctgttgca
tctgaaaccaattgggaatcagtcacaagcccggtcttgggcatttcctatcgctctcca
tcagtgactgaccccacgcttactgtggaagccctagatgaaaccgttgctgggtttgat
actgtggaggaattgctcaagcactttaatccagagacatggcgagaagatctggatcac
ctgtacacagagagcgccccacctcgaggcagaagtttctatgagaggaagtcgaaagtt
gatttagacaggctgaatgatgaggcaaagcgttacagctgcactccaaggaattactct
gtcaatgttagggaggagctgaagcaaagcaatgccgtctttttccctcgctgcctcctg
gtccagcgctgtggaggaaactgtggttgtggaacgacaaatgggaaatgcgcttgtacg
gcaggaaaactcgtgaagaagtatcatgaggtgctgagatttatccccgaagcaggtcat
ctcaggaggaggggcaaaaccaagcacaatatgtcactgatagatattcaactggagcac
catgaacgctgcgactgtgtctgcagtgcgaggccaccgcgataa
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