Thamnophis sirtalis (common garter snake): 106551835
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Entry
106551835 CDS
T06107
Symbol
SRF
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106551835 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106551835 (SRF)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
106551835 (SRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
106551835
NCBI-ProteinID:
XP_013925469
UniProt:
A0A6I9YNH5
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MLPSQAGNGAAALARSAVMGMARTSSGRPGVGLPRGANGGGAAAAGVRGPGNGTGPPSGQ
GTIGGRFDRDRDVSAAVAASGSEGDSDSAEDEELVGERRGIKRTLGDMELGVGGTEAAAA
AAATGAYGGVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELST
LTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTSDQRMS
ATGFEETDLTYQVSESDSSGETKDSLKPAFTVTNLPGTTSTIQTAPTTSTSMQVSSGPSF
PITNYLAPVSASVSPSTVTSANGTVLKTTGTSAVASGGLMQIPTGFTLMSGGAVAQQVPV
QAIQVHQAPQQTSPTSDNSTDITQTSSSGTVTLPATIMTSSVPTTVGGHMMYPSSHAVMY
APTSGLTDGGLAVLNAFSQAPSAMQVSHGQVQDQGGVPQVFLTAPSGTVQIPVSAVQLHQ
MAVIGQQSSSTANLTELQVVNLEASHSSKSD
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttacccagccaggccgggaacggcgctgccgccttggcccggagcgcggtcatgggc
atggcgcgaacctcctccgggcggccaggtgtcgggcttccccgcggggcgaacggcggc
ggcgctgctgctgcaggagtgcgcgggcccggcaacgggacgggccctcccagcggccag
gggacgatcggcggtcgcttcgaccgagaccgggatgtaagcgcggcggtggcggccagc
ggcagcgaaggcgattcggactcggccgaagatgaggagttggtgggcgagcgccgcggc
atcaagcggactttgggggacatggaactaggggtggggggtacggaggcggcggccgcg
gcggcagcgaccggggcttacggcggggtgagcggggctgtgagcggcgccaagcccggc
aagaagacccgcggccgggtcaagatcaagatggaatttatcgacaacaagctgcgacgc
tacaccaccttcagcaagaggaagactggcatcatgaagaaggcctatgaactttccacc
cttacgggcactcaagtgttgctacttgtggccagtgagacaggccacgtctatactttc
gccacacggaaactgcagccaatgatcaccagcgagacgggcaaggcactgatccagaca
tgcttgaattctcctgactcccctcctcggtcggacccaaccagcgatcagcgcatgagt
gctacgggctttgaggaaacggaccttacgtatcaggtgtctgagtcggacagcagcgga
gaaacaaaggactcactgaagccagcattcactgtcaccaaccttccagggacgacgtcc
accatccagacagcacccacaacatccacatccatgcaggtcagcagtgggccctcgttc
cccattactaactacttagcaccagtctctgccagtgtcagccccagtacagtcaccagt
gccaacggaacagtgctgaaaaccactggaaccagcgcagtggcctctggaggactcatg
cagatacctaccggctttaccctcatgtcaggtggtgcagtggctcaacaggttcctgtg
caagccatccaggtgcatcaggccccccagcaaacgtctcctacaagcgacaacagcact
gacatcacacagacctcttccagtgggacagtgaccctgccagctacaatcatgacttca
tctgtgccaaccactgtgggaggccatatgatgtaccccagttctcatgcagtgatgtat
gctcctacatcgggcctcacagatggtggccttgcggttctcaatgccttctcccaggcc
ccatcagcaatgcaggtttcacatgggcaagtccaggatcagggtggagtccctcaggta
ttcctgacagctccgtcaggaacagttcagatcccagtctcagctgttcagcttcaccag
atggctgtcattggtcagcagagcagcagcactgccaacttgacagagctgcaagtggtc
aacttggaggcatcacacagttccaagagtgactga
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