Thamnophis sirtalis (common garter snake): 106551882
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Entry
106551882 CDS
T06107
Symbol
HPS3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106551882 (HPS3)
Membrane trafficking [BR:
tsr04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
106551882 (HPS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
106551882
NCBI-ProteinID:
XP_013925521
UniProt:
A0A6I9YN01
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MVQVYNLHPFGSQQVVPLKQEPALFCCGRDVLLVVCGSGACKVEVFADLGEPLGFFNTLG
RVLFMAYGEVGDYVATIEEKHSTLFLRVYVNWRCMSSGNSRVCVRMQGHSPEASHTEMSK
EQMSIIEIPLSDPPTCFSCCPVSGDLLVGCKNKLILFHLKHLFVSEDVKVLDFERSLILH
MEKFTPSEVAFCAGYIAITAELEVLVFKLLIGEKVTLAGNSKQHIGESVEPEIPINEGIT
EEVDQTQSESDGFVFCQQPMELLGEESSKCEISVILESISLTDEDLNIQVQYVLYRRFAL
DVSSFPFSVEDAKLHSLQLLPMHESGTSVTAKEGDTTKRDFLSLFCFFSLPHVAYLYTIN
NLVELISTYQYSERSQQAVLTPQFLHVITSNNLQCFTVRCSAVAARNQDPYIDTTLKACP
PASLDVCTLRMQLFIGLKAISHFKHHIIILTKADSEDFLEKKTFKRRLLYRKTDNIKTKV
PPESERGWNLYIVNTTSTLQLYREMVEYSKTYENVRTESCIHLLSEAHLLVRTALMDPAL
KDLEEKEALLAAFHESCALLGDCYSRFDTKDFHLSLPYYKMSRLSISDVLKRVTFEDKTQ
KYEKGFIFYLQHSLYEDTDEKLNEDLAAKVLQIFHCAQPNQIPHTLCSPCMKNVCPEMAM
EYLELIEKMAPSVDIGHLVTLAKASVALKKADRDRCEKELDSQAEMKLVCGFIREPRLLK
QHIEGQMFPTELALFLKETRPGFLLASLLALHENNKMELEEAGSYIKMLSGKNEDAVPQL
LVDFWEALLVACTQEDVSQKLHFKLATQYIWRLSRKELPDTEPLKTTEDLINSCSDYGLI
FSWIIFMMSLVPLPDWNSCDDLSKLQSLLCSPSFRISSILPYVKNIPEDSISGLSIHVLC
DTCLGQHKAAIDKLLDRCPEAVIPYAQHELRDEHQALWWNKLFPELCKRTRHVGENYPVF
LSSLQETLSVLATALELRDFLNVLPEDGNAAFFLPHLLQCSRRLVT
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggtctacaacttgcacccctttgggtcgcagcaagtcgtccctctgaagcag
gaaccggcgctcttttgctgcgggcgggacgtactcctggtggtctgcggctccggcgcc
tgcaaggtggaagtgtttgcggacctcggcgagccgctcggttttttcaataccctgggt
cgagtgctcttcatggcctacggcgaagtgggagattatgtggccactattgaggagaaa
cacagcaccctcttcttacgagtgtatgttaactggagatgcatgtcctctggcaactca
cgtgtttgtgtccggatgcaaggtcatagcccagaagcttcccatactgagatgtcaaaa
gaacaaatgtcaatcatagaaattcctctttcggatcctcccacatgtttctcctgttgc
cctgtatcaggagacctcctggttggctgcaagaataagttgattttattccacttgaag
catttatttgtgagtgaagatgtaaaagtgcttgactttgaacggtccttaattttgcac
atggagaagttcaccccatcagaagttgcattttgtgcagggtatattgctatcacagca
gaactggaagtccttgtcttcaagctactaattggggagaaagtaactttggctggtaat
agcaaacagcatattggtgaatctgtagagcctgaaatacccattaatgaaggtataaca
gaggaagttgatcaaactcaatcagaatcagatgggtttgttttctgtcagcagcccatg
gaacttctcggagaagaaagtagcaagtgtgagatatctgttattttggagtcaattagc
ttaactgatgaagatttaaatattcaagtgcaatatgtcctgtacaggcgttttgctctt
gatgtgtcctcatttcctttttctgttgaagatgccaaactgcactctcttcagctgctt
ccaatgcatgaatcagggacttctgtcacggctaaggaaggagatacaactaaacgagat
ttcctgagtttgttttgctttttctctctaccacatgtggcatacctatacacaatcaat
aacttagtggaacttatttctacctaccagtattcagaaagatctcagcaagcagttctt
acaccccaattcctgcatgtcattacaagcaacaacctgcagtgctttacagtgagatgc
agtgcagtagcagctcggaaccaagacccctacattgatacaacattaaaggcttgtccc
cccgcgtctcttgatgtttgtaccttgagaatgcagctttttatagggttgaaagccatc
tctcacttcaaacaccatatcatcattttgacaaaagcagattctgaggactttctcgag
aaaaaaacatttaaacgaagactcctttaccgaaagactgataacatcaaaaccaaggtt
cccccagaatctgaacgtggttggaatttgtatattgtgaacacaacttcaactctccaa
ctctacagagaaatggtagaatacagtaaaacctatgaaaatgtaagaacggagagttgt
attcatctcttaagtgaggctcatttgctagtcagaacagctttaatggatcctgctctg
aaagacttggaggagaaggaagctctgctggcagcatttcacgagagttgcgctcttctt
ggagactgttacagcaggtttgacactaaagacttccatctttcactcccttactataaa
atgtccaggctttctatatctgacgttctgaagcgagtaacatttgaagataaaacacag
aagtatgaaaaaggttttatattctacttgcagcactccttgtatgaagacacagatgaa
aagctaaatgaagatttggctgcaaaagtgcttcagatattccactgtgctcagccaaac
cagataccccacaccctctgcagtccttgcatgaaaaatgtctgccctgaaatggcaatg
gaatatctggaattgatagaaaagatggcaccatctgttgacattggccatctggtgacg
ttggccaaggcttcagtggctctgaaaaaggcagatcgggatagatgtgaaaaggagctg
gacagccaagcagagatgaaattagtatgtggttttattcgggagccaagacttctaaaa
cagcacattgaaggacagatgttcccaactgaacttgctttgtttctcaaagaaaccaga
cctggatttctcctagcttcattattggctttacatgagaataataaaatggaactggaa
gaagcagggtcttatatcaagatgctgagtggtaaaaatgaagatgctgttccccaactc
ttggtagacttctgggaagctttgcttgtagcatgtactcaggaagatgtttcacagaag
ttgcattttaagcttgctacacagtatatttggagactgtccaggaaagagcttcctgac
actgagcctctgaaaaccactgaagatttgataaattcctgcagtgattatggacttata
ttttcttggataatattcatgatgtcgttagtacctcttcctgattggaattcatgtgat
gacctttcaaaattgcaatctctcttatgcagtccttccttcagaatatcctccattctc
ccatatgtgaagaatattccagaagattccatctctggtctgagcatacatgttctttgt
gatacatgtttaggacagcataaagcagctattgacaaacttctggatagatgccctgaa
gctgtcataccttatgcccagcatgagctgagggatgaacatcaggctttatggtggaac
aaactttttcctgaactctgtaaacgaaccagacatgttggtgaaaactaccctgtattt
ctgtcatcactacaagaaacgttatcagtccttgccacggcactggaattgagagacttc
cttaatgttttacctgaagatgggaatgcagccttcttcttgccccacttgcttcagtgc
agcagaagattggtgacttaa
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