Thamnophis sirtalis (common garter snake): 106551956
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Entry
106551956 CDS
T06107
Symbol
PDLIM2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106551956 (PDLIM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106551956 (PDLIM2)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
106551956 (PDLIM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LIM
DUF4749
PDZ_2
DmmA-like_C
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-GeneID:
106551956
NCBI-ProteinID:
XP_013925594
UniProt:
A0A6I9YNV0
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MSVSVNLTGPAPWGFRITGGRDFRKPIIVSKVIEHGKAALGDLRPGDVIISINGENTSEM
LNVEAQNKIKQSSGKLQLQVDRSQQFSPSQTNGESSPEMLAIRFQDVVRTRDNGNNSVRS
SYSSPASISPRATSPYSPSSPGYRPGSPYSPVRPSLPTEIRGEPMINSRSFQSMGTSPQS
QQESSNRQIQEQRNFTHSRESPVTVLPPLNGSPSPGRYSFSNPWEIRKDQERSPSSYNRS
YSLDTEPNMHHLEGDSEVYKLMQENRDTRAAPRQSSTFRLLQVALELDEKEGMATHFPSQ
LSPNLHKPVSSATAGNSQKLHTCEKCDSPITYQAVKIQENRYRHPSCYVCTDCGLNLKMR
GHFWVGEEMYCEKHARQRYQSPADDGTILAVYSQS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgagcgtgaatctgactggtccagctccctgggggttccggattacgggagga
agagacttccgaaaacccatcatcgtatctaaggtgatagagcatggaaaagcagcccta
ggtgaccttcgacctggagatgtcatcatttccatcaatggggagaatacctctgagatg
ctcaacgtggaggcacagaacaagataaagcagagctctgggaagctgcaattgcaagtg
gacaggtcacagcagttttctcccagccagaccaatggcgaaagttccccagagatgttg
gccatacgatttcaggatgtggtgagaactagagacaatggtaataattcagtgagatct
tcctactcaagcccagcttccatcagcccacgtgccaccagcccctacagtccttcatct
cctgggtatcgacctggcagcccatacagcccagtgagacccagtctgcccacagagatc
agaggggagcctatgataaacagccgcagcttccagtcaatggggacttcacctcagagt
cagcaagagtcaagcaacagacagatacaagagcaaaggaacttcacccattccagggag
tcccctgtgactgtgctgcctccattaaacggctctccatcccctggtagatactccttc
tccaacccttgggagatcaggaaggaccaggaaagaagtccatcttcctataaccgcagt
tacagcttggatacagagccgaatatgcaccatttggaaggagactcggaggtgtacaag
ctgatgcaggaaaaccgtgatacaagggctgcgccccggcaatccagcactttccgcctg
ctccaggtggctctggaattggatgaaaaagagggcatggccacccatttccccagccag
ctctctcccaatttgcacaagccggtgagcagtgctacggcagggaactctcagaagctg
cacacctgtgagaaatgtgacagccccatcacatatcaggctgtgaaaattcaagagaac
cgctaccgccacccgtcttgctatgtttgcaccgactgcgggctcaacctgaagatgcgt
ggccatttctgggttggggaagagatgtactgcgagaaacacgcccgccagcgctaccag
agcccagcagacgatggcaccatcctggctgtctattcccagtcttaa
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