Thamnophis sirtalis (common garter snake): 106551968
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Entry
106551968 CDS
T06107
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106551968 (VPS50)
Membrane trafficking [BR:
tsr04131
]
Protein recycling
Others
EARP complex
106551968 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DcpS_C
Motif
Other DBs
NCBI-GeneID:
106551968
NCBI-ProteinID:
XP_013925612
UniProt:
A0A6I9YMY4
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQDSIHDLSPLENFRIPSKEELRELREQPTDPQAQQEIINSIEEI
YFSNDSFDIVKYELEQLPTVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQTAYVKELE
RVTSLQTSLKLAAVICTNGRRHLNSAKEGFTQASLGLLANQRKRQLLVGLLKSLRTIKTL
QQTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMDWHEKYDHGESPSSDGN
NILDTEETNFDRSYVKKKLEHGLSRIWQDVQLKVKIYLLGTDMSNFKYDDFIFVLDIISR
LVQVGEEFGGSKSEVLQDSIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKSSFSIL
QLHEFKFMGQSRSPTVSPSKQPALETEGDLTLFEQYRNGGNPFEIQANNKDDETEDVLAS
NGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRTRKRSDYCLNK
VNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYMYAIYTFFGRNNTFE
STGLGLSSSRLRTTLNRIQESLIDLDVSSDVAGTLTAVEERKEKVPMPHLSHLVVLTSSN
SLYGLAERVVATESLVFLAEQFEFLQSHLDTVMPPAKKPFLQQFYSQTVSTASELRKPIY
WIVAAKAIDYEQMLLQMANMKWDVKEIMSQHNIYVDSLLKEFEQFNKRMNEVSKRVRIPL
PVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKE
FVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKAKQKLLAAIDDLDR
PKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctctgatgacccgacagggtcttaaaagtcctcaggatagtatt
catgatttgagcccccttgagaacttcagaattccaagcaaggaagaacttcgagaactc
cgggagcaaccaactgatcctcaggcccagcaggaaataattaacagcattgaagaaatc
tatttttccaatgattcctttgatattgttaagtatgagttagagcagctgccaactgtt
cttagtcttcaggaattggaagagtatagagacaaactaaaacagcagcaagcagctgta
tccaaaaaagttgcagacttgatccttgagaaacagactgcatatgtcaaggaacttgaa
cgagttacatcattgcaaacaagccttaagttagctgctgttatctgtacaaatggaaga
cggcatctgaattcagccaaggagggctttactcaagccagcttgggtcttcttgcaaat
caacggaaacgccagttgctagttgggctgctaaaatctctaagaacaataaaaaccctg
caacagaccgatgtgcgtttgagtgaaatgttggaggaggaagattatccaggggctata
caattgtgcctggaatgccagaaggcagctagcactttcaaacactacagttgcataagt
gaattgaattcaaaactacaggacaccttggagcaaattgaggagcagttagatgttgca
ctttctaaaatatgcaagaactttgacataaaccattatactaaggtgcaacaggcatac
aggctacttggaaaaacacagacagccatggaccaactacatatgcactttactcaagcc
attcacaatacagtattccaggttgttctagggtatgttgaattgtgtgcaggaaacacc
gacaccaaatttcagaagcttcaatacaaggatctttgcacacacattacatcagacagt
tacattccatgccttgctgatttgtgcaaagctctatgggaggtcatgctgagttattat
cggacaatggattggcatgaaaaatatgaccatggggagtctccatcttctgatggaaat
aacatcctggatactgaggagaccaattttgaccgcagctacgtgaaaaaaaaattggag
catggcctttcacgaatatggcaggatgtccaattgaaagtgaagatctatttgctgggc
accgatatgtctaacttcaaatatgatgacttcatatttgtactggatattattagcagg
ctggtgcaggttggagaagaatttggtggcagcaagtcagaagtgttgcaagattccatt
agaaaacaaagtgttaattatttcaagaattatcacagaactcgtcttgaagaactgcga
atgttcttagagaatgagacttgggaactttgtcctgttaaatcaagtttcagcatattg
caacttcatgaatttaaattcatgggacaatcacgttcccctactgtgtcaccaagcaag
cagcctgcattagaaacagaaggagatttaactctttttgagcaatatcgtaatggagga
aatccctttgaaatccaagccaacaacaaagatgatgagacagaagatgtgttggcttct
aatgggtatgaatcggatgaacaagaaaagagcgcttatcaagaatatgatagtgacagt
gatgttcctgaagaactgaaaagggactatgttgatgaacagactggagatgctccagta
aaaagtgtttctcgagaaactctgaggaccaggaagagatcagattattgcctcaacaag
gtgaatgccccaattttaaccaacactacacttaatgtaattaggcttgttggtaaatat
atgcaaatgatgaacattttgaagcccattgcatttgatgtgattcactttatgtcgcag
ctttttgactactatatgtatgcaatatatacattttttggccgaaataacacatttgaa
tcaacaggacttggacttagcagcagtaggcttcgcaccacattgaatagaatccaggaa
agcttgattgatctggatgtgtcctctgatgtggctggaactctgactgctgttgaagaa
agaaaggaaaaagttccaatgccacatttaagtcatcttgtagtcttgacatccagcaac
agtctttatggtttggcagagagagtggtagccacagaatccttagtatttttggctgaa
caatttgagtttctccagtctcatcttgatactgtaatgcctccagccaagaagcctttt
cttcaacagttctactcacagacagtttcaacagccagcgaactacgtaaacctatatac
tggattgtagctgctaaagcaattgattatgaacagatgttacttcagatggcaaatatg
aagtgggatgtgaaagaaatcatgtcacaacacaatatttatgtcgattcactcttaaaa
gaatttgaacagtttaacaagaggatgaatgaagtgtcaaagagagttcgtattccactg
ccagtttcaaatattctttgggaacactgcatacgactagccaatagaacaattgtagaa
ggttatgccaacgtcaagaagtgtagcaatgaaggtcgtgctctgatgcagttggatttt
caacagtttttaatgaagctggagaaactcacagatattaggcctattccagacaaggaa
tttgtggagacctacattaaagcttattatttgactgaaaatgacatggaacgttggatc
aaggaacacagagaatattccaccaagcaactgaccaatttggtgaatgtttgtctggga
tctcacatcaacaaaaaagctaagcagaaactactagcggctattgatgacttagatagg
cctaaaagataa
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