Thamnophis sirtalis (common garter snake): 106551976
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Entry
106551976 CDS
T06107
Symbol
IRX2
Name
(RefSeq) iroquois-class homeodomain protein IRX-2 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106551976 (IRX2)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
106551976 (IRX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
106551976
NCBI-ProteinID:
XP_013925623
UniProt:
A0A6I9YNY1
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All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSEELARSSSGSAFSPYPGSAAFTAQAAA
TGFSSPLQYSTDPATGFPSYMGSPYDAHTTGMSGAISYHPYGSPAYPYQLNDPAYRKNAT
RDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAP
RNKSEDEDEDLEGEGGGIRSKEESGSDKGRDSNETSAEDEGISLQVDSLTDHSCSAESDG
EKGPCRAGDPLCESGSECKDKYEELEEDDDEEDVDDDEEEEEDEAGRGLPPKPVTSSPLT
GVEAPLLGHPHGQDSARNAAKGALDARISPSVASQTTQASKPKLWSLAEIATSDLKHHPH
PHPHSLGQSCPPSGPPPSTPHNAAYSPSSLLGRHIYYTSPFYSNYTNYGNFNALQGQGIL
RYNSAAVASNEGLNQAVLTGGGGGGAALKAASENSLKSIAGHLEQHYKPPSSEPKKDPTE
MCTVGVQPYL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcctaccctcagggctacctctaccagcccccgggctcgctggcgctctactcctgc
ccggcttacggggcgtcggcgctggcggcgcccaggagcgaagagctggccagatcatct
tcgggctcggcgttcagcccttatcccggatccgcggcgttcacggcccaagcggcagcc
accggcttcagcagcccgcttcaatactccaccgacccggccacgggattcccctcctac
atgggctctccttacgacgcccacacgacgggcatgagcggggccatcagctaccatccc
tacggcagcccagcctacccctaccagctaaatgacccggcctaccggaagaacgccacg
cgagacgccacggccacgctgaaggcctggctgcaggagcaccgcaagaacccgtacccg
actaaaggcgagaagatcatgctggccatcatcactaagatgaccctcacgcaggtctcc
acctggttcgccaacgcccgcaggaggctcaagaaagagaacaagatgacttgggcgccc
cgcaacaagagcgaggatgaggacgaggacctggaaggggagggcggcgggatccggagc
aaggaggagagcggctcggacaaaggacgggacagcaacgaaacgtcggcggaggatgaa
gggattagcttgcaggtggattccctcaccgaccattcctgctcggccgaatcggacggg
gagaaaggcccgtgcagggcgggagacccgctctgcgagtcaggctcggagtgtaaggac
aagtacgaggagctcgaggaagacgacgacgaagaggacgtggacgacgatgaggaggag
gaagaggacgaggcgggcagaggcctcccccccaagcccgtcacctcctcccctctcact
ggggtagaagccccgctcctgggccaccctcacggccaggattctgccagaaacgccgcc
aaaggtgctctggacgcgcggatctcaccttcggtggcttcccagaccacgcaagccagc
aagcccaagctctggtctctggcggaaatcgccacctcggaccttaagcatcatccgcac
ccgcatccccacagcctgggccagagctgcccgccctcgggcccaccgccttccaccccg
cacaacgctgcctactcgccttcttcgctcttggggaggcatatttattacacgtcgcct
ttttatagcaattacacaaactacgggaacttcaacgccctccagggacagggcatcttg
aggtacaactcggccgccgtggcctccaacgagggactcaaccaagcggtcttaactggc
ggcggcggcggcggcgcggctctgaaggcggcctcggaaaactcgctgaaaagcatcgca
ggccacctcgaacagcattacaagccccccagttccgagcccaagaaagaccccactgaa
atgtgcacagtaggagttcaaccgtacctatag
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