Thamnophis sirtalis (common garter snake): 106552012
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Entry
106552012 CDS
T06107
Symbol
SLC27A1
Name
(RefSeq) long-chain fatty acid transport protein 1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03320
PPAR signaling pathway
tsr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
106552012 (SLC27A1)
09158 Development and regeneration
04382 Cornified envelope formation
106552012 (SLC27A1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tsr01004
]
106552012 (SLC27A1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsr02000
]
106552012 (SLC27A1)
Lipid biosynthesis proteins [BR:
tsr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
106552012 (SLC27A1)
Transporters [BR:
tsr02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
106552012 (SLC27A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
106552012
NCBI-ProteinID:
XP_013925666
UniProt:
A0A6I9YND2
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MHTIGVCTASLGSLGLMRFFGISWTWSIAAALGIYIGSGGWNFLRIIFKTALRDLLGLSV
LLRVKYELYHHRKAKSNIPKVFQKVVRKYPDKVALIYEATDDKWTFRQLDEYSNSVANFF
YQQGFREGDVIAIFMESRPEFVGFWLGMAKVGIEAALINFNLRLDSLTYCVKTSGAKAII
FGGELSAAISEVNGILGKNMSKFCSGDFRPESCPPDTKHLDPLLAQTSKSPPTHVSTKGL
DDRLFYIYTSGTTGMPKAAIVVHSRYYRIAAFGYYAYRMTTDDIIYNCLPLYHSAGNIMG
IGQCVVHGLTVVIRKKFSASRFWDDCVKYKCTIIQYIGEICRYLLNQPVREAEMQHQVWL
AIGNGLRPTIWEDFTQRFRIKQIGEFYGATECNCSIANLDGKVGACGFHSRILPNVYPIR
LVKVNEDTMELIRGTNGLCISCQPGEPGLLVGRINQEDPLRRFDGYVNQNATNKKIAYNV
FKKGDQAYLTGDVLVMDDLGYMYFKDRSGDTFRWRGENVSTTEVEGILSHILSKTDVAVY
GVEVPGVEGKAGMAAIADPEAKLNPNVLFLEIQKALPPYARPIFLRFLPEVDTTGTFKIQ
KTRLQREGYNPHQMSDRLYFLDVKLGKFLPIDECIFERIQTGKISL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcacacaattggggtttgtactgcttcccttggatcactgggcctcatgagattcttt
ggcatatcttggacatggagtattgcagctgctttgggcatttatattggcagtggtggg
tggaacttcctccgcatcatctttaagacagccctgagagatttactaggactctcggtg
ctattgcgggtcaaatatgaactgtatcatcacaggaaagccaaaagcaatattcccaag
gtattccagaaggtggtcaggaaataccccgacaaagtggccttgatttatgaagctact
gatgacaaatggacattccggcaactggatgaatattccaactctgtggccaacttcttt
taccagcagggctttcgtgagggtgatgtaattgctatctttatggagagccgaccagag
tttgtcggcttctggttaggcatggctaaagtgggtattgaggcagctctcatcaacttc
aacttgcgacttgattcattgacttactgtgtgaaaacctcaggggcaaaagccatcatc
tttggcggggagctatcagcagcaatctctgaagtgaatggcatcctggggaaaaatatg
tccaagttctgttctggagattttagacctgaatcctgccccccagataccaagcacttg
gaccctctgctggcgcagacatcgaaatctcctccaactcatgtttcaactaagggatta
gatgatcggctgttctacatttacacctctggaacaaccggaatgccaaaagctgccatt
gtggtgcacagtagatattaccgaattgctgcttttggttattatgcttacagaatgacc
acagatgacataatctataactgcctaccattgtaccactcagcagggaacatcatgggc
attggccagtgtgtggttcatggtctgacggtagtgattaggaagaaattttctgccagt
cgcttctgggatgactgtgtgaaatacaagtgtacaatcattcaatatattggggagatt
tgcagatacctgctgaaccaaccagtgcgggaggcagaaatgcagcaccaggtgtggcta
gctattggaaatggcttgaggcccaccatttgggaagacttcacacagcggttccgaatc
aaacagattggggagttctatggcgctactgagtgtaactgtagcattgctaatctagat
ggaaaggtgggagcctgtggcttccatagccggattttgccaaatgtatatcctatccgc
ttggtgaaagttaatgaggataccatggagctaatacgtggcacaaatggcctttgtatc
tcctgtcaaccaggagaacctggacttcttgtgggcaggataaaccaagaagaccccttg
cggagatttgatggctatgtcaatcagaatgcaactaacaagaaaatagcttataatgtc
ttcaagaaaggagatcaagcttatcttacaggagatgtcctagtgatggatgaccttggc
tatatgtacttcaaagaccgcagtggggatacattccgttggcgcggagagaatgtttcc
accaccgaagtggaaggaatcctcagccatattctcagcaagacagacgtggcagtttat
ggagtagaggtaccaggagtagaaggcaaggctggaatggcagctattgctgacccagaa
gcaaaactgaatcccaatgttctgtttttggagatacagaaagcactacctccatatgca
cggcctatcttcctccgatttctcccagaggttgacaccacaggcactttcaagatccag
aagacccgtttacaaagagaaggctacaatccacaccagatgtctgatcggttatacttt
ttggatgtgaaacttggcaagttcctaccaatagatgagtgcatttttgagaggatccaa
actgggaaaatttctctttga
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