Thamnophis sirtalis (common garter snake): 106552189
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Entry
106552189 CDS
T06107
Symbol
ATG4A
Name
(RefSeq) cysteine protease ATG4A
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04136
Autophagy - other
tsr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106552189 (ATG4A)
04136 Autophagy - other
106552189 (ATG4A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106552189 (ATG4A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106552189 (ATG4A)
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106552189 (ATG4A)
Peptidases and inhibitors [BR:
tsr01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
106552189 (ATG4A)
Membrane trafficking [BR:
tsr04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
106552189 (ATG4A)
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106552189 (ATG4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
106552189
NCBI-ProteinID:
XP_013925878
UniProt:
A0A6I9YN54
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MESVDYLEELPETDEPTWILGRQHHLKTEKSNLLSDIGSRIXVFHVPSAFSHAGGTGPSS
DAGWGCMLRCGQMMLAQALICQHLGRDWQWEEYKKQPEEYKKILCCFLDRKDCCYSIHQM
AQSLLNFEGYLHRARFLTNCCLALFRKLALFDEWNSLAVYVSMDNTVVIEDIKKMCRAPP
QGCPRSHCSSLSYRSSVNPAKTLGAPGGSWKPLLLIVPLRLGINHINPVYVDAFKECFKM
PQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQVFVDSDESGAVDDHSFHCQQAPHRMK
IMNLDPSVALGFFCKEEKDFDNWCSFVQKEIHKKQSLRMFELVQKHPPHWPPFIPPTKPE
VTTTGAELIDSTDKLFEMEEEFEILSV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgtagattatttagaagaacttcctgagacagatgagcccacctggatctta
ggaagacagcaccacctgaaaacagaaaaatctaatcttctttcggacattggctctcgt
atttgngtgttccatgtgccttcggcatttagtcatgctggtggtacaggtccttcgtca
gatgctggctggggttgcatgttgcggtgtggacagatgatgttggctcaggctctgatc
tgtcaacatttgggaagagattggcagtgggaggaatacaaaaaacaaccagaagaatat
aaaaagattttgtgctgcttcctggacagaaaagattgctgttactcaattcatcaaatg
gctcaatcgttgttgaactttgagggttacttgcatcgcgcacgctttttgactaactgc
tgtcttgctttgttcaggaaacttgcactctttgatgaatggaattccttagctgtttac
gtgtctatggacaacacggtagtgattgaagatatcaaaaaaatgtgccgggccccaccc
cagggttgccccaggtctcactgcagttcactgtcctataggagctccgtcaacccagcc
aagaccctgggagctcccggtggcagttggaagcctctgttgctgatcgtgccccttcgc
ctggggataaaccacatcaatccggtttatgtcgacgcttttaaggaatgctttaagatg
ccacaatctttaggagctttaggaggaaaaccaaacaatgcctactactttataggattt
ctgggaaatgaattgatctacctggaccctcacaccactcaggtctttgtagattcggat
gagagtggtgcagttgatgaccatagcttccactgccagcaagccccccaccggatgaag
ataatgaatctcgatccctctgtagctttaggattcttttgtaaagaagaaaaggacttt
gataactggtgtagctttgtacaaaaggagatacataagaagcagagtctacgaatgttt
gagctggttcagaagcacccaccacactggccccctttcatacctcccacaaaaccagaa
gtcaccaccaccggagcagagctcattgactccacggataaactctttgaaatggaagaa
gagtttgagatcttgagcgtatga
DBGET
integrated database retrieval system
