Thamnophis sirtalis (common garter snake): 106552234
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Entry
106552234 CDS
T06107
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106552234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106552234
04121 Ubiquitin system [BR:
tsr04121
]
106552234
03036 Chromosome and associated proteins [BR:
tsr03036
]
106552234
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106552234
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106552234
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106552234
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106552234
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106552234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_4
Ank_3
Ank_5
zf-RING_5
ANK_LRRK2
Prok-RING_4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-RING_10
Rtf2
Ank_KRIT1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
106552234
NCBI-ProteinID:
XP_013925933
UniProt:
A0A6I9YN96
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAQEQRPQQPGTPWKATRLALRRLAESLKCALCTNILKKPVNLGSCGHVFCLTCVGHCVG
AACPICQVPITKQDVKINRKLDNIIKLYSKLQTLQDKDFSECEDNSPALGKKVGEAETKR
KQIKMSFSPRSRRMKFTLKTSPKKLEQLKESVKDRESCNLASIYDFVSSPPHEKPFREEQ
TPKCHKTEEGTVRRKSRLLKKASQQPPGNSVAAFPMTDSTVSSPSLPFPGITSPRRNLED
FACARDPEHPKVSRSCEEREAFLKKFPKNLSAKRNHKGETLLHTTSIEGNLSAVECLLKK
GADPNIKDYAGWTPLHEACNHGHKQIVELLIRHGALLNVTGYQNDMPLHDAARNGHKEIV
ALLLLHGASRDAVNIFGHKPVDYAETEEMKSLLMQPGQNDSSSVIQYAEHINLDCCKKGP
PVLLGSGL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggagcagcgcccgcagcagcccggaaccccgtggaaagcgacgcggctggct
ttgagacggctggccgagagcctgaaatgcgccctttgtactaacattctgaagaaacct
gtgaacctaggaagttgcggtcatgtcttctgtctaacttgtgtaggccattgtgttggc
gcagcttgcccaatatgtcaggtgccaatcactaaacaggatgtgaaaataaacaggaaa
ctggacaacatcatcaaactctacagcaaattgcaaactctgcaggacaaggacttctca
gagtgtgaagataactcgcctgctttgggaaagaaagttggagaggcagaaactaaaagg
aaacaaatcaaaatgagtttcagtcctcgcagtaggaggatgaaattcaccctgaagacc
agcccaaagaaattagagcagctgaaggaatctgtcaaggacagggagtcttgtaactta
gcctccatctatgactttgtttcttcacctcctcatgagaagcctttcagagaggaacag
acacctaaatgtcacaaaacagaagaggggaccgtccgccggaagtcacgattgctgaaa
aaggcctcccagcagccgcccgggaattctgtggcggcctttcccatgacggactctaca
gtttcttccccatctctgccatttcctggaataacatctccccgaaggaacttggaagac
ttcgcatgtgccagagatccagaacatccaaaagtgtccagaagttgtgaagaaagggag
gcattcctcaagaaatttcccaaaaacttatcagccaagagaaaccataaaggggagact
ttgctccatactacttctattgagggtaatctttctgctgttgaatgcttgttgaaaaag
ggagctgatcccaacattaaagattatgctggttggacaccgctgcatgaagcctgtaat
catggacataagcagatagttgaattactgataagacacggggcactgctgaatgtgact
ggatatcagaatgatatgccacttcacgatgctgccaggaatggacataaggaaattgtg
gcactgctgcttttgcatggagcttctcgagacgcggttaatatatttggtcacaaacct
gtggattatgctgaaacagaagagatgaaatcgcttctaatgcagccaggacagaatgat
tcttcttcagttattcagtatgcagaacacataaacctagattgctgtaaaaaagggcct
ccggttcttcttgggagtggtctc
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