Thamnophis sirtalis (common garter snake): 106552265
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Entry
106552265 CDS
T06107
Symbol
NLRX1
Name
(RefSeq) NLR family member X1
KO
K12653
NLR family member X1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04137
Mitophagy - animal
tsr04621
NOD-like receptor signaling pathway
tsr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106552265 (NLRX1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106552265 (NLRX1)
04622 RIG-I-like receptor signaling pathway
106552265 (NLRX1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tsr04054
]
106552265 (NLRX1)
Pattern recognition receptors [BR:
tsr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106552265 (NLRX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
DUF815
NOD2_WH
AAA_22
AAA_16
AAA_7
VapE-like_dom
FtsK_SpoIIIE
TsaE
TrwB_AAD_bind
AAA_29
RNA_helicase
AAA
NB-ARC
nSTAND3
Motif
Other DBs
NCBI-GeneID:
106552265
NCBI-ProteinID:
XP_013925969
UniProt:
A0A6I9YPY2
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MLQEATSRPASPKPNQRVPKNVATSEAIQKHKKSLADWFRRQPNEERQFGPSFALDATHV
DPVIRESSLEEILKPSPDLTIQNQLQGSCSHTIGLQNLFDEDLCGQEVKNVVLYGTVGTG
KSTLIKKMVMDWCREQLPQFELLLPFSCEDLSQGSSPVSLRRLVTKKYLHLRDVAPLLGS
TNLKVLFILNGLDRLNLNFRLARTELCCDPNEPLLPAAIVVNLLRKYMMPEASIIVTTRP
SAARRIPSKFVGRYVEVCGFSDLNLQKLYFQMRLRQPECAGTSGPPTAEQANEQDNLLEM
LSRNLERHNQIMAACFLPSYCWLVCTTLHFLYFTKAVPPTQTLTGIYTSFLRLNFSGEVL
DSTDPSNISMMKYVAKTVGKLAYEGVMSRQTCFAEKDLRRCFEVEMKTESELNLLNTFRS
DVLRFFLTPCVQSGKEHTFVFTIPAMQEYLAALYVVLGEKKTLVQRVGKEVSEIIGKVSE
DVALVLSLVTKFLPLRILPLLFNLIKIFPRYFSRFGTKDRDTIARTMAVEMFKEEDYFNE
DVLDQINFSILGVEGPMRHPDEASDDEVFELFPIFMGGLLSQRNRAILDQLGCPIKNLAA
FEIAKAMKKTVIRNSRKGLPPSELMDYLFFLHEFQNERFTAEAIQSLRTINLSSVKMTPL
KCAVLASVVGTTSHDVEELNLASCHLDVGSLRTLFPILLRCKKLQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttacaagaggcaacatctcggcccgcttcccccaagccaaaccagagagtgccgaag
aacgtagcgacttctgaagccatccagaaacacaagaaaagtttggcggattggtttcgc
cggcagcccaacgaggagaggcagtttggaccttccttcgccctggatgccacccacgtc
gacccagtgatccgggagagctccctggaggagatcttgaagccttctccagacctgacc
atccagaaccaactccaaggttcttgctctcataccattggtctccagaatctttttgac
gaggacctctgcgggcaagaagtgaagaacgtggtcctctacgggacggtgggcaccggg
aagagcaccctcatcaagaagatggtgatggactggtgccgtgagcaacttcctcagttt
gagctgctcctccccttctcctgcgaagacctttcccagggcagcagccccgtgtctctg
cgccgcctggtgaccaagaaatacctccatttgcgggatgtggccccactccttggctcc
accaacctcaaagtgctcttcatccttaatggccttgaccgactcaacctgaactttcgc
ctggcccgcactgagctctgctgtgaccccaatgagcccctcttgccggctgccattgtc
gtcaacctcctcaggaagtacatgatgcccgaggccagcatcattgtcaccactcgtcct
tctgcagcacgccggatccccagcaagtttgtgggacgctacgttgaagtctgtggcttc
tcggacctcaacctccagaagctttacttccagatgcgcctacggcagcctgaatgtgcc
ggaacgtctggtcccccgacagcagagcaggccaacgagcaggacaacctgttggagatg
ctctccaggaatctggagaggcacaaccagatcatggctgcctgcttcctcccgtcttat
tgctggttggtctgcacgactttgcacttcctttatttcaccaaggcggtgccgccgacg
caaacgctgacgggcatctacaccagcttcctacggctcaacttcagcggggaagtgctg
gacagcaccgatccctccaacatctccatgatgaagtacgtggccaagacggtgggcaag
ttggcctacgaaggggtgatgtctcggcagacctgcttcgcggagaaggatctccgccgc
tgctttgaggtggagatgaagacggagagcgagctgaacctcttgaacaccttccggagt
gatgttctccgcttcttcttgactccctgcgttcagtcgggcaaggagcacacgttcgtc
ttcaccatcccagccatgcaagagtacctggctgccctttacgtggtcttgggggagaag
aagacgctggtgcaacgggtgggcaaggaagtctctgagatcattgggaaggtcagcgaa
gacgtggccctggtgcttagcttggtcaccaaattcttgccgctgcggatcctgcccctc
ctcttcaacctcatcaagatcttcccccgctacttcagccggttcggtaccaaggaccgg
gacaccattgcccgcaccatggcagtggagatgttcaaagaggaggactacttcaacgag
gatgtcctggaccagatcaacttcagcatccttggggtggaaggtcccatgcgccacccg
gatgaagcttccgacgatgaggtctttgagctcttccccatcttcatgggcgggttgctg
tcccagcgtaaccgggccatcttggaccagctgggctgtcctatcaagaacctggccgct
ttcgagatcgccaaggccatgaagaaaacggtcatccggaatagccgcaagggattgccg
ccatctgagctgatggactacctcttctttctgcacgagttccagaacgagcgcttcacg
gcggaggccatccaatccttgaggaccatcaacctctcttcggtgaagatgacccctctc
aaatgcgcggtcctggcttccgtggtgggcaccacgagccacgacgtcgaggagctcaat
cttgcctcttgccatctcgatgtgggcagcctgaggaccctcttccccatcttgctacga
tgcaagaaactccagtga
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