Thamnophis sirtalis (common garter snake): 106552273
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Entry
106552273 CDS
T06107
Symbol
USP5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106552273 (USP5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106552273 (USP5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106552273 (USP5)
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106552273 (USP5)
Peptidases and inhibitors [BR:
tsr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106552273 (USP5)
Ubiquitin system [BR:
tsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106552273 (USP5)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106552273 (USP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_3
UBA_4
Motif
Other DBs
NCBI-GeneID:
106552273
NCBI-ProteinID:
XP_013926016
UniProt:
A0A6I9YPC9
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MAELSEALLSVLPSIRVPKAGDRVHKDECAFSFDTPESDGGIYICMNTFLGFGKQYVTKH
YEKTGQRVYLHLKKTRRLKEENNSSAGDPPRKKPTRLAIGVEGGFDLPEEKYEYDEHVKI
VILPEHLDIPQDGLDGLPDMVKDRISNAIEAILTADSASRKQEVQAWDGEVRRVSRHAFS
LQQLQNGIRIPPCGWKCSKCDMRENLWLNMTDGSISCGRRYFDGSGGNNHAVEHYRETGY
PLAVKLGTITPDGADVYSYDEDDMVLDPNLAEHLAHFGIDMLKMQKTDKTMTELEIDMNQ
RIGEWELIQESGVQLKPLYGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEKIF
QSAPTDPTQDFSTQVAKLGHGLLSGEYSKPALSVGEQQLDQKGIQEGIAPRMFKSLVGKG
HPEFSTNRQQDAQEFFLHFINMVERNCRSSENPNEVFRFLVEEKLKCLATEKVKYTQRVD
YIMQLPVPMEAALNKDELLEYEEKKRLAEEEKQPLPELVRAKVSFTSCLEAYGAPEQVDD
FWSTALQAKSVALKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPDELDISALHG
TGLQPEEEEMPDIAPPLVTPDEPKGSLGFYGNEDDDSFCSPHFSSPTSPMLDESVITQLV
EMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLVLPGSSGPGSTITCPDPPS
EDSVATIVSMGFSRDQAIKALKATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAAESI
SESIPVGPKVRDGPGKYQLFAFVSHMGTSTMCGHYVCHIKKDNRWVIYNDQKVCASEKPP
KDLGYIYFYQRIPS
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgagtgaggcactactttctgtgctaccgtctatccgggtgcccaaggcc
ggggaccgcgtccataaggatgagtgcgccttctctttcgacactccggagtcagatgga
ggaatatatatctgtatgaacacattcctgggctttggaaagcagtatgtgacaaaacat
tatgaaaaaacaggccagcgggtctatttacatcttaagaaaacacgtagattgaaagaa
gaaaataattccagtgctggtgatcctccccggaagaaaccaacccgcctagctattggt
gtagaagggggatttgacctcccagaagagaaatatgaatatgatgaacatgtcaaaata
gttattttaccagagcatttggatatccctcaggatggactcgatggtctgccagatatg
gtgaaggacaggatttctaatgcaattgaagctattctgacagcagattctgcttcccgt
aaacaggaggtacaggcttgggatggggaggttcggcgtgtgtccaggcatgccttttct
cttcagcagctacagaatggtatccgtatccctccttgtggctggaaatgcagcaagtgt
gacatgcgggagaatctgtggctcaacatgacagatggctccatctcgtgtggacggcgt
tactttgatggcagtggaggcaacaaccatgctgtagaacattatagagaaactggttac
cccttggctgtaaagttgggaaccatcactcctgatggagctgatgtctactcttacgat
gaagatgacatggttctagaccccaatctggctgagcacttggcacattttgggattgat
atgcttaaaatgcaaaagacagacaagacaatgacagagctagagattgatatgaaccag
cggattggagagtgggagttgattcaggagtctggggtgcagttgaaaccactgtatggc
cctggctatacgggtatccgtaaccttggaaacagttgctatctcaactcagtagtgcag
gtgttattcagcataccagacttccaacgaaagtatgtagacaaactagagaaaatattc
caaagtgctcctacagatcctacacaagacttcagcacccaggtagctaagcttggccat
gggcttctctcgggggaatattccaaacctgctctttcagttggagaacaacagttggac
cagaagggtatacaagagggcattgctccgcgtatgttcaaatctcttgttggcaaaggt
catccagaattttcgactaatcggcagcaagatgcccaagaattcttcctgcacttcatt
aatatggtggagaggaactgtcgtagttctgaaaacccaaatgaggtctttcgcttcttg
gtggaagagaaactcaagtgcttggccacagagaaagtgaaatacacacagcgtgtggat
tacattatgcagctgccagtacctatggaagcagccctaaacaaagatgagttgctagaa
tacgaagaaaagaagcgactggcagaagaagaaaagcagccactgcctgaattggttcgt
gccaaggtatcttttacctcctgtcttgaggcctatggagccccagaacaagtggacgac
ttctggagcacagccttgcaggccaagtctgtggcactcaaaacaaccagatttgcctct
tttccagattatttagtaatccagatcaagaaattcacttttggcctagattgggtaccc
aaaaaacttgatgtttccattgaaatgcctgatgaactggacatctctgcacttcatggg
acaggattgcagcctgaggaggaggagatgcctgacatagccccaccactggtgacacca
gatgagcccaaaggtagcctgggtttctatggcaacgaggacgacgactccttctgctcc
cctcacttctcctctccaacatctcccatgttggatgagtctgtgattactcagttagtg
gagatgggttttccaatggacgcctgccgcaaggctgtatattatacaggaaacagtggg
gctgaggcagcaatgaactgggtcatgtcccacatggatgatccagattttgcaaaccct
ctagttcttccgggatccagtgggcctggttccaccatcacctgcccagatcccccatct
gaagatagtgtggcaaccattgtctctatgggtttttcccgggatcaagctataaaagca
ctaaaagctacgaataacagccttgagcgagctgtggactggatcttcagccatattgat
gatctggatgcagaagcggccatggatatctcagaggggcgttcagctgcagaatctatc
tctgaatccatccccgtgggaccgaaagttcgggatggacctggaaagtaccagcttttt
gctttcgtcagtcacatgggcacatccactatgtgtggtcattatgtctgtcatatcaag
aaggataataggtgggtaatctataatgaccagaaagtttgtgcctcagagaagcccccc
aaagatcttgggtacatctacttttaccagaggatccccagctag
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