Thamnophis sirtalis (common garter snake): 106552275
Help
Entry
106552275 CDS
T06107
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04120
Ubiquitin mediated proteolysis
tsr04137
Mitophagy - animal
tsr04144
Endocytosis
tsr04340
Hedgehog signaling pathway
tsr04350
TGF-beta signaling pathway
tsr04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106552275
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
106552275
04350 TGF-beta signaling pathway
106552275
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106552275
04137 Mitophagy - animal
106552275
09144 Cellular community - eukaryotes
04520 Adherens junction
106552275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106552275
04121 Ubiquitin system [BR:
tsr04121
]
106552275
03029 Mitochondrial biogenesis [BR:
tsr03029
]
106552275
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106552275
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
106552275
Autophagy
Mitophagy
Other mitophagy associated proteins
106552275
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
HECT type E3
106552275
Mitochondrial biogenesis [BR:
tsr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106552275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
106552275
NCBI-ProteinID:
XP_013925977
UniProt:
A0A6I9YNX2
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MLAHVHFMEALEMRATGSLGILKVKVSLFLFSRQNQLKDQPQQQQQVVSLCQLSDEAECL
TVPRYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKDLWKRLM
IKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYF
HFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMELVDPDLHNSLVWILENDITG
VLDHTFCVEHNAYGEIIQHELKPNGKSIPVTEESKKEYVRLYVNWRFLRGIEAQFLALQK
GFNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKANTRLKHCTPDSNIVKWFWKAVELF
DEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLPKAHTCFNRIDIP
PYESYEKLYEKLLTAIEETCGFAVE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgttagctcacgtgcattttatggaagccttggaaatgagagcaaccggaagtcttgga
atcttgaaagttaaagtctctctgtttcttttcagtcgtcaaaatcaacttaaagatcag
ccgcagcagcagcaacaagttgtttcactgtgccaactttcagacgaggctgaatgtctt
actgtgccaagatacaaacgagatctagtacaaaaactcaagattttgaggcaagagctc
tcccagcagcagccccaagctggacactgccgtatagaggtctccagggaagaaattttt
gaggagtcttatagacaagtcatgaagatgagaccgaaagacctatggaagagattaatg
ataaaatttcgtggggaagaaggccttgattatggaggtgttgccagggaatggctgtac
ttgctatcccatgaaatgctgaatccatattatggcctcttccagtattcccgtgatgac
atctatactttacagataaatccagattctgctgttaacccggaacatttatcctacttc
cattttgttggtcgaatcatgggaatggctgtgtttcacggacattatattgatgggggc
tttacgttgcctttttataaacagctgctaggaaagccaattacattggacgacatggaa
ttagttgacccagatcttcacaacagtttagtatggatactggagaatgatattacagga
gtcttagaccatacattttgtgtggagcacaatgcatatggtgaaatcatacagcacgaa
cttaagccgaatggcaaaagcattcctgtcacagaagagagtaaaaaagaatatgtcagg
ttgtatgtaaactggcgatttttaagaggaattgaagctcagttcttggctctgcagaag
ggttttaatgaagtaattccacagcatctgctgaagacatttgatgagaaggaactagag
ctcatcatttgtggccttgggaaaatagatgttaacgactggaaggccaacacaaggtta
aaacattgcaccccagatagcaacattgtcaagtggttctggaaagctgtggagctcttt
gatgaagagaggagggctcgattacttcagtttgtgaccggttcatccagagtgcctctt
cagggtttcaaagcattacaaggtgctgctggcccaagactgtttaccattcaccagatt
gatgccagcacaaataatctgccaaaagctcatacttgcttcaatcggatagacattcct
ccttacgaaagctatgagaagctctatgaaaagctgctaaccgccattgaagaaacatgt
gggtttgccgtggaatga
DBGET
integrated database retrieval system
