Thamnophis sirtalis (common garter snake): 106552301
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Entry
106552301 CDS
T06107
Symbol
SLC16A5
Name
(RefSeq) monocarboxylate transporter 6 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106552301 (SLC16A5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106552301 (SLC16A5)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106552301 (SLC16A5)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106552301 (SLC16A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
SPRY
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-RING_5
ANCHR-like_BBOX
Sina_RING
PRY
U-box
zf-Nse
Motif
Other DBs
NCBI-GeneID:
106552301
NCBI-ProteinID:
XP_013926015
UniProt:
A0A6I9YQU3
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MQKIGFLFLEDNIVCPVCLEVFKDPVTTACGHNFCMSCLQVYWEHLALIGEQPYCPQCRE
PFSSTPQLRKNITLGEIAMRFAQEETQDPQNLSGFKNVPCDFCFSQKLKAVKSCLQCIAS
LCDNHIQSHYTDKIFKNHQLVEPLSDLKGSMCAKHRKLLELFCKEEGKFICQICVREEHK
NHEAISLKQERRKKEVEIQRLHASVENQVLILVEDHQKHRARVNYLMKVIKNTRDEVSWA
FTEVLKEFKQLQAKVMDFIDQEEKSALLDMRNSIQRRYEQLADLKKQKLWLANLMNDPSD
FQFLQDFPKIKAISDCSGALIGLKCEELSSFVGIKQTLSDLKSQISMIGLCFINKILQKG
ITMVPYELLPTPADRKTLLKYYCVLNFDATTANEELFLFKETHSVLNMGILLETYSKPIP
GFNHWPQLLGTRSLCEGCHYWEAEISNGWLCLGVAYSYRHKTEKSCMLYLIGRNNYSWCL
EWDSVNFSVWHNNIQTVLRGDYYKTIGVFLDYAAGSLTFYGITSSINIIYRFLTTFTEPL
YPAAMVFYEKTPCKDAPRRRSIP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagattggctttctttttcttgaagacaatattgtatgtccagtatgccttgag
gtattcaaagacccagtcaccacagcctgtgggcacaacttctgtatgagttgcttgcag
gtttattgggaacacctagctctgattggggaacaaccttactgccctcagtgccgggaa
cctttcagttcaacacctcagctccgcaaaaatataaccctgggagaaattgcaatgaga
tttgcacaggaggaaactcaagatccacagaacctgtctggtttcaagaatgtcccgtgc
gatttttgtttctcgcaaaagttaaaagcagtcaagtcttgcttgcaatgtatagcttcc
ctgtgtgataatcacatccagtctcactacacagacaagattttcaagaaccaccagttg
gtggaacctttgagtgacttgaaaggcagcatgtgtgccaaacatcgtaagctgctagag
ctattctgcaaagaggaagggaaatttatttgccaaatctgtgtccgggaagagcataag
aaccatgaagccatttctctgaagcaagaaagaagaaagaaagaagtggagatccagaga
ctacatgccagtgtggaaaaccaggtcctgatattggtagaagaccatcagaaacataga
gcaagagtgaattaccttatgaaagtgataaagaataccagagatgaagttagttgggcc
tttacagaagtattgaaagaattcaagcaactgcaggctaaggtgatggacttcattgat
caagaggaaaagtcagctttacttgacatgaggaattctattcagcgtagatatgagcaa
cttgcagatcttaagaagcagaaactgtggcttgcaaatctgatgaacgatccaagtgac
tttcaattcttgcaggacttcccaaaaataaaggccatatctgattgctcaggagctttg
attggactgaaatgtgaggaactcagcagttttgtggggattaaacagacattgagtgat
ttgaaatcccaaatttcaatgattggactctgcttcatcaataaaatcctccagaaggga
atcacaatggtgccatatgaactgttacccacacctgcagaccggaagactctcttaaag
tactattgtgtcctgaattttgatgccaccactgccaacgaagagctcttcctctttaaa
gagactcactccgtgctgaacatggggattttgttggaaacctattcaaaacccatccct
ggatttaaccattggccccagctgctcggtacccgcagcctttgtgagggctgccattat
tgggaggctgagatttcaaacggctggctgtgcctgggtgttgcctacagctaccggcat
aagaccgaaaaatcgtgcatgttgtatctgattggcaggaataattattcatggtgcttg
gagtgggactcagtgaatttctctgtctggcataataatatccagactgtgctgcgtggt
gactactacaagaccattggggttttcctggactatgctgcaggctccctgaccttctac
ggcatcaccagttccataaacatcatttaccgtttcttaaccacattcactgaaccactg
tacccagctgccatggtattctatgaaaagacaccttgcaaagatgcgccaagaaggaga
agcatcccctag
DBGET
integrated database retrieval system
