Thamnophis sirtalis (common garter snake): 106552384
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Entry
106552384 CDS
T06107
Symbol
DSCAM
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106552384 (DSCAM)
Cell adhesion molecules [BR:
tsr04515
]
Immunoglobulin superfamily
DSCAM family
106552384 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
Pur_ac_phosph_N
C2-set_2
Ig_4
V-set_CD47
Sp38
C1-set
Ig_C17orf99
fn3_2
C2-set_3
ChitinaseA_N
DUF6377
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
106552384
NCBI-ProteinID:
XP_013926118
UniProt:
A0A6I9YNQ7
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MWRLAALLFQSILNVFGEDLHASLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGSRFLITSTGA
LYIIDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFEHRKAMAGQ
QVELPCKASGHPAPKYRWLKDNVPWEPDSRFRPMVTGLLIENTRPSDSGNYVCEVWNSYG
TAEVIGRLHVKQPLKATISPRKVKSSVGSRVSLSCSVSGTDDHELFWYRNGEIINTGNNV
RIIGINHETLIMDGMSKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEKVVSP
GEGVSLMCNVKGTPLPTITWTLDENPIIKDGNHRISQIITSEGNVVSYLNISSTQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTFIHCRVIGYPYYSIKWYKN
SNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPVDQDGIYGKAVILNCSAEGYPVPT
IVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYFVSTK
EVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARS
IALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHASSTYNIRM
YAKNRIGKSEASNELTITTDEAAPDGPPQDVHLEPISSQSIRVTWKAPKKHLQNGVIRGY
QIGYREYSAGGNFQFNIISIDTTGDNEIYTLDNLKKFTQYGMVVQACNRAGIGPSSQEII
TTTLEDVPSSPPENVQAIATSPETISITWSTLAKDALNGILQGFRVIYWANLLDGELGDI
KNVTTVQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASTVFVSWLPPIKLNGVIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIILPCKAVGDPVPTVKWM
KESNGTPSLVMIDGRRSIFSNGSFVIHTVKAEDSGYYSCVATNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLET
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFILEYRPFGTTVWTTAQRTSLTKSYIVYDLQEATWYELQMRVCNSAGCAEKH
AKFATLNYDGSTIPPLIKSVVQSEEGLATNEGLKMLVTISCILVGVLLLFVLLLVVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDSLTS
STPSESGICRFTASPPKPQDGGRVTNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVPGTSR
DLGQTCLEPQKSRTLKRPAVLEPVPVEASSTREAQSWQSGGVATLPQREGAELGQAAKMS
SSQESLLDSRSHLKGNNPYAKSYTLV
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggctggccgccctcttgttccagagcatcttgaatgtttttggtgaagatcta
catgccagcttatattttgtcaatgcatctttgcaagaggtagtgtttgctagcaccacg
gggacattggtaccctgtccagcagcgggaatccctcctgtgacgctcagatggtaccta
gcaacgggcgaggagatctacgatgtcccagggatccgccacgtccaccctaatggcact
ctccaaattttccctttccctccttcaagctttaataacttaatccatgataacacttac
tattgcacagctgaaaatccttcagggaaaatcagaagtcaggatgttcacattaaggcc
gttttacgggaaccatatacagtccgtgtggaggaccagaaagccatgagaggcaatgta
gcggtcttcaagtgcattatcccctcctctgtggaggcctacatcactgttgtctcatgg
gagaaagacacagtctcacttgtctcaggatctagatttctcatcacatccacgggagcc
ttgtatattatagatgtacagaatgaagatggattgtataattaccgatgtatcactcgg
cacagatacactggagaaacacgtcagagcaacagtgctagactttttgtatcagaccca
gcaaactcggctccatctattctggatgggtttgaacatcgtaaagccatggcaggacag
caagtggagctgccttgcaaagcatctggacacccagcaccaaaatatcgctggctgaag
gacaatgttccctgggaacctgacagccggttccggccaatggtgacaggccttctgata
gaaaatacgcgtccatcagactcaggcaactatgtgtgtgaagtctggaacagttatggt
acagctgaagtgataggccgtttgcatgtaaaacagcccctaaaagccaccatcagtcct
cggaaagttaagagcagcgttggtagtcgtgtgtccttgtcctgcagtgtgtctggaaca
gatgaccatgaactcttctggtatcgaaatggagaaatcatcaatactggcaataatgtg
agaatcattgggatcaatcatgagactcttattatggatggcatgtccaaaagtgatggt
ggggcataccagtgttttgtacgcaaagacaagatgtctgcacaagactatgttcaagtg
gtactagaagatggaactcctaaaataatttcagccttcagtgagaaagtggtaagccca
ggagagggtgtatctttgatgtgcaacgtgaaaggaactcctcttcctaccatcacatgg
actttggatgaaaatcccataattaaagatgggaaccaccgtattagtcagatcatcacc
tctgaggggaatgtagtcagctacctaaacatctccagtactcaggtccgagatggcgga
gtatatcgttgtactgccaacaactcagctggagtcgtcctctaccaggctcgaataaac
gtaagaggaccagccagcattcggccaatgaaaaatattacagcaatagcagggcgggat
accttcattcactgtcgtgtcattggttacccttattactcaatcaagtggtataagaat
tctaatttgctcccttttaatcatcgtcaagtagcctttgaaaacaatggaacactgaag
ctctcagatgtacagaaggaggtggatgagggggaatacacatgcaatgttctggttcag
ccccaactgtccaccagccagagtgtacatgtgacagtaaaagtgccaccttttatccag
ccctttgaatttccaaggttctctattggccagcgagtcttcattccatgcgttgtggtc
tcaggggacttgcctattacaatcacctggcagaaggacggtaggccaatcccagccagt
cttggggtgaccattgacaacattgacttcaccagctccttaaggatttctaatctttcc
cttatgcacaatggaaactatacctgtatagcaagaaatgacgcagcagctgtggagcac
caaagccaattaattgttagagttccccccagatttgtggttcagccagttgatcaagat
gggatttatggaaaagctgtgatcctcaactgctctgcagaaggctaccctgttcctacc
attgtctggaaatactccaaaggtgctggagttccccagttccaaccaattgccttgaat
gggcgtatccagcttctgacaaatggctccttgttgatcaagcatgttctggaagaagat
agtggatactacctctgcaaggtcagcaatgatgtgggggctgacgtcagcaagtccatg
tacctcactgttaaaattcctgctatgataacctcctatccaaataccaccttggcaaca
cagggtcaaaagaaagagatgagttgcacagctcatggggagaaacccatcatagtccgc
tgggagaaagaagataggataattaatcctgaaatgtcccgctatttcgtttctacaaaa
gaagtgggtgatgaagtcatctctactttacagattttgccaacagtccgagaagattcc
ggtttcttctcctgccatgccatcaattcatatggagaggatcgtggaataattcagctc
actgtgcaagaacctccagatcctccagaaatagaaattcgagaagtgagagcacgtagc
attgccctaagatggaccatgggatttgatggaaatagtccaatcacaggctatgatata
gaatgcaaaaacaagtctgactcatgggattctgtccaaagaaccaaagatgtttcccca
cagctgaatcaagccaccatcattgacctacatgcttcttccacctacaacatccgcatg
tatgcaaaaaatcggattggcaaaagtgaagccagcaatgaacttactatcaccactgat
gaagcagctcctgatggaccacctcaagatgttcatcttgagcccatatcttcacaaagt
attagggtaacctggaaggcaccaaagaagcatttgcaaaacggagttattcgtggttat
cagattggttaccgggaatacagcgccggaggcaatttccagttcaacatcatcagtatt
gatactactggagacaatgaaatttataccttagataaccttaaaaaattcacacaatat
ggcatggttgtgcaagcatgtaatcgagctggaataggaccatcttctcaagaaattatc
actactactcttgaggatgttcctagttcccctccggagaatgtccaagccattgctaca
tcaccagaaaccatctctatcacctggtccacactggccaaggatgccctcaatggaatt
ctacagggatttagggtcatatactgggctaatcttctggatggagagctgggagatata
aaaaatgtcactacggtacaaccatcattagagcttgatggtttggaaaaatacaccaac
tatagcatccaggtattggcattcacacgagctggagatggggtcaggagtgaacagatt
ttcacacggacaaaggaggatgttccaggtcctcctgctggagttaaagcagctgcagca
tcagcttctactgtttttgtatcttggctacctcccatcaaattaaatggtgtcatccga
aaatatactgtattctgctctcatccatatcccacagtaatcagcgaatttgaagcttct
cctgactcattttcctacagaatccctaatttgagccggaatcgacaatacagtgtctgg
gttgtggctgtaactgctgcaggaaggggcaacagcagtgaaatcatcaccgtggaacca
ttagctaaagctccagccagaattttgacattcagtggcacagtaacaactccatggatg
aaggatattattctcccttgtaaagctgttggagatcctgtacctaccgttaaatggatg
aaagaaagtaacgggacacccagtctagtgatgattgatgggcgaagaagcatctttagc
aatggcagttttgttatccatactgtgaaagcagaagattcaggatattacagttgtgtg
gctactaataactggggatcagatgaaattattttgaatttgcaagttcaagttccacct
gaccagcctagacttaccgtatccaaaaccacttcttcctccatcactctttcttggata
cctggagacaatggaggcagctctattcgaggttacatactgcaatactctgaagacaac
agtgaacaatggggtagttttcctattagccctagtgaacgttcctatcgattggaaacg
ctgaagtgtggcacatggtacaagtttactctgacagctcagaatggtgtgggaccaggc
cgtatcagtgagatcatagaggccaaaacacttgggaaagagccacagttttcaaaagaa
caagaactctttgccagtattaacaccactcgcgtaagattgaaccttattggctggaat
gatggtggttgtccaatcacctcctttattctggaatacagaccatttgggacaacagtg
tggactaccgcacaacgaacatcacttaccaaatcatatatagtatatgatcttcaggag
gcaacctggtatgaactgcagatgagagtctgtaacagtgctggctgtgctgaaaaacac
gccaaatttgcaacactcaactatgatgggagtacaatccctccactcattaaatcagtt
gtccaaagtgaggaaggtctggcaaccaatgaagggctaaagatgctggtgactatttcc
tgtatcttggttggggtcttgctgctttttgtgcttctgctggttgtaagaaggagacgg
agggaacagagactgaaaagactcagagatgcaaaaagtttggctgaaatgcttatgagc
aagaacacaaggacatcggatacccttaacaagcagcaacagacactccggatgcatata
gatattcccagagctcagcttctcattgaagagagagatacaatggaaaccattgatgac
agatctacagtcttgctaactgatgctgattttggagagacatcaaaacagaaatcattg
acagttactcatacagtacattatcagtcagtctcacaagccactgggccactggtggat
gtttctgatgccagaccaggaacaaatcctacaacaagaaggaatgcaaaagctgggcct
acagcccggaacagatatgctagccaatggactctcaatagaccccatcctacaatatca
gcccacactttaacaacagactggaggctgccaactcccagggccacagggtctgttgat
aaagaaagcgacagctacagtgttagtccatcgcaagatacagatcgagcaagaagcagc
atggtctccacagaaagtgcctcctccacatatgaagagctagccagagcatatgaacat
gccaagatggaagagcagctgcgacatgcaaagtttaccatcacagaatgctttatatca
gacacctcatcagagcagcttacagcagggactaatgaatacacagacagcctaacctca
agcaccccatccgaatcagggatttgcagattcactgcatctcctcccaaacctcaggac
ggaggacgcgtgacaaacatggctgttccaaaggcacatcggccaggtgacctcatgcat
ttgccaccatatcttcggatggactttttgttaaaccgaggtgttccaggcactagcaga
gacttgggacagacctgcctggaaccccaaaaaagccgaaccttgaagcgcccggccgtc
ttggagccagtccctgtggaggcttcctccacaagagaagcacagtcatggcaatctggc
ggcgtagcaacattacctcagcgagaaggagctgagctaggacaggcagcgaaaatgagt
agctcccaagaatccctcctggactctcggagccatttaaaaggaaacaatccctacgca
aaatcttatacccttgtataa
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integrated database retrieval system
