Thamnophis sirtalis (common garter snake): 106552418
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Entry
106552418 CDS
T06107
Symbol
NPAS4
Name
(RefSeq) neuronal PAS domain-containing protein 4
KO
K26457
neuronal PAS domain-containing protein 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106552418 (NPAS4)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106552418 (NPAS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
HLH
Motif
Other DBs
NCBI-GeneID:
106552418
NCBI-ProteinID:
XP_013926159
UniProt:
A0A6I9YQG3
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MYRSTKGASKARRDQINAEIRHLKDLLPIAEGDKLRLSYLHIMSLACIYTRKSIFFSKGA
TLEGLESMLSSQDLDDFMQTLPGFLLAFTGEGKLIYVSESVAEHLGHSMVDLVAQGDSIY
DIIDPADHIVMKTQLALPSPLSTERLFRCHFNTSKTIRRQSAGNKLILIRGHFHQPPPGS
YWSTNPIFTAFCTPLDPKPRMGQNAFFLSAFESRHTKDLAIMDISECVIFHLGFEKTELF
CKSWYGLIHPEDLSHASAQHYRLLGDQSNTQAEMVIRLQAKDGVSWIWVYSLLRLENAEI
PIVSHNYVISDSEAWCLKQQLSAEGSQGPYGLESTTTFLESLLSPGQLSSPDQVFTPAAG
TPTTTLLASTFDFSTAGVPEGPSTFSKPPEGLPEETMDPGNISSIEDAPPGSSLSLLVKE
PGFGYLILPQGGYGQAFASEKPGGKPKSKDLVCTPPYTPHQSSPFLFGTPELYGAQGAGG
PAALPLATASSTNSPAALAAVTELFYAQEPCNVLYEKLPPTPDSPGKGGCAVMSLPEIRG
PLYVDVPMVPEGILTPEASPIKQTFFQYSEKEKNEIELLAQQICSLAETFGSAASQELAE
NDLEGFREDPPCSSPELSPAPQPCPEFQLPKTWRSVDFSLLTCLEDDLLDDSALEALLQD
LSSFLFEKDGAGTRCPRHQFCGGDVSSSPLGLDTEDSSSPGCFAPSPRMDLAPEQPPCFL
EDLTSFETAFETRASNSPCEGLDELYQLQSQRPKGFQEGCRGIKRDPKIFKDFDLVDANA
TFHDDALKDDYFCFLLIKVRPIFHTEKDKTPKTFFET
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtaccggtccacgaaaggagcctccaaggcacggcgggatcaaatcaacgcggagatt
aggcatctcaaggacctgttgcccattgccgaaggagataaactccggctctcttatctg
catatcatgtcgctggcttgcatctatactcggaaatccatcttcttctccaaaggtgca
actctagaaggcttggagagcatgctctcttcccaggacttagacgacttcatgcagacc
cttcccggcttccttttggcattcacgggcgaaggcaaactcatctatgtgtcggagagc
gtggctgagcacttgggccattctatggtggatttagtggcccaaggagacagcatctac
gacatcattgacccggccgatcatattgtgatgaagactcagttggcgttgccttctccc
ttaagcaccgaacgtctcttccgttgccacttcaacacttccaagacaattcggcgtcaa
agtgcaggaaataagctgattctgattcgtggtcacttccaccagcctcctccgggttct
tattggtccaccaatcctatcttcacggccttctgcactcctctagatccgaagcccaga
atgggtcaaaatgcgttcttcctgtccgcttttgagagtcgccacacgaaagacttggcc
atcatggatatctctgaatgcgtaatcttccatctgggctttgagaaaaccgaactcttc
tgcaaatcgtggtacggcttgatccatccagaagatctgagccacgcttcggcgcagcat
taccgactgttgggggaccagagcaacacgcaagccgaaatggtgatccggctacaagcg
aaagatggcgtcagctggatatgggtctactccctgcttcgcttggagaacgcagagatc
cccatcgtttctcataactacgtcatcagcgattccgaagcctggtgcctgaaacagcaa
ctctcggccgaaggatcccaaggcccatacggtcttgaaagcaccaccaccttcttggaa
agtcttctatctcctgggcagctgtccagccccgatcaagtcttcacgcccgcggccggc
acgcccaccaccactctcctggcctcgaccttcgatttcagcaccgccggggtccccgaa
ggcccctcaacgttcagcaagcctccggaagggctgcccgaagagacgatggaccctggc
aatatctcctccattgaggacgccccgccaggttcctccctcagcctgctggtcaaagaa
ccaggcttcgggtacctcatcctcccgcaaggaggttacggacaggcgtttgcaagcgag
aagcccggcggcaaacccaagtccaaagatttggtctgcactcctccttacaccccacac
cagagttcacctttcctctttggcactccggagctttacggagcccagggcgcaggcggt
cctgcggccctgcctctggcgacggcttccagcaccaactcccccgccgccctcgccgcc
gtgactgagctgttttatgcccaagaaccctgcaatgttctctatgagaaacttcccccg
acgccggacagccccggtaaagggggctgcgctgtcatgagcttgccggagatccgaggt
cccctctatgttgacgtgcctatggtacccgaagggatcttgactccggaggcctcgccc
atcaagcaaacgttcttccaatattccgagaaggagaagaacgagattgaactgctggct
cagcagatctgcagcctggccgagacgttcggctccgctgcttcccaagagctcgccgag
aatgacctggaaggtttccgagaggacccgccatgctccagccctgaactctctcctgcg
ccgcaaccttgcccggaattccaactgcccaaaacctggaggagcgtcgacttctctctc
ttgacctgcctggaggatgacctcctggacgacagcgccctcgaggccctcctgcaagac
ctgtcatcctttctgtttgagaaagacggggcagggacgaggtgccctcgccaccagttc
tgcggtggcgacgtcagtagtagtccacttggcttggacaccgaagatagtagtagccca
ggatgctttgctccctcgccaaggatggacttagctccagaacagccgccgtgttttctg
gaagacctgacctccttcgaaacagcctttgagacacgtgcctcaaactccccctgtgag
gggttagatgagttgtatcaactccagagccaaaggccgaaaggcttccaggaaggatgt
agaggcataaaaagagaccccaagatatttaaagacttcgacctagttgatgctaatgct
acctttcatgatgatgctttgaaagacgattatttttgttttctcttgattaaagtcagg
cccattttccatacagaaaaagacaagacccctaagacgttttttgagacctaa
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