Thamnophis sirtalis (common garter snake): 106552422
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Entry
106552422 CDS
T06107
Symbol
POLR3B
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03020
RNA polymerase
tsr04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106552422 (POLR3B)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
106552422 (POLR3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106552422 (POLR3B)
Enzymes [BR:
tsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106552422 (POLR3B)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
106552422 (POLR3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
106552422
NCBI-ProteinID:
XP_013926162
UniProt:
A0A6I9YPE2
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MDAAELGAFTPEQAAAPINTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKAN
EKITSDADPMWYLKYLNIYVGTPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRG
SQRIIRNALPVGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQE
QLSKNRIIVEADRKGTVGASVTSSTHEKKSRTNITVKQGRFYLKHNTLSEDIPIAIIFKA
MGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYLGNKVRRQRMWGGPKK
TKMEEARELLATTILAHVPVKEFNFRSKCTYTAVMVRRVILAQGDNKVDDRDYYGNKRLE
LAGQLLSLLFEDLFKKFNSELKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGN
WSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSD
TPEGEACGLVKNLALMTHITTDMEDGPIIKLAGNLGVEDVNLLCGEELSYPNVFLVFLNG
NILGVIRDHQKLVYTFRLMRRAGYINEFVSISTNLADRCVYISSDGGRLCRPYIIVKKQK
PSVTEKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKETTHLEIEPFT
LLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVKTK
TIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYT
NQTFDKVMGPMLDAGTRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQTPLEGS
SASQQSQYKDVPVIYKGATDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRHGQ
KGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTA
FGGSKVKDVCEDLVRYGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHAR
ARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQC
GLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSKYNE
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagcagagttgggagcttttactcccgagcaagcggcggctcctataaatacg
gtggaggaaaaatggagactacttccagcttttttgaaggtaaaaggacttgtaaagcaa
catatagattcattcaattatttcatcaatgtagagataaagaaaataatgaaagccaat
gaaaaaattacaagtgatgctgatccaatgtggtatttaaaatatctcaatatttatgtg
ggtactccagatgttgaagaaagctttaatgtaacaagacctgtttctcctcatgagtgt
cgcctgagagatatgacttattctgccccaattactgtggacattgaatatactcgaggc
agccaaagaattattcgtaatgcattacctgttggcagaatgccgataatgttacgcagt
tccaattgtgttctcactgggaagactccggcagaatttgcaaagcttaatgagtgtcct
ttagatccaggtggctacttcattgtcaaaggagtggaaaaagtaattcttattcaagag
caattatcaaaaaaccgaataatagtggaagctgacagaaaaggaacagttggtgcctca
gttaccagctctacgcatgaaaagaagagcagaacaaatataactgtgaagcaagggaga
ttttatctgaagcacaacaccctttcagaagatattccaatagcaataatctttaaggcc
atgggggttgagagtgaccaagagattgtgcagatgattggaacagaggagcatgtgatg
gctgcatttggccccagcttggaggaatgccaaaaagctcagattttcacacagatgcag
gcattgaaatatttgggaaataaagtccgaaggcagcgaatgtggggaggtcccaagaaa
accaagatggaggaagcaagagagttgttggcaacaactattcttgcccatgtgccggta
aaagaattcaacttccgctccaagtgcacatacacagctgtgatggtccgcagggtgata
ctagctcagggagataacaaagtggatgacagagattattacggaaataagaggctggaa
ctagcaggacagcttctgtcccttctatttgaagacttgttcaaaaaattcaactctgag
ttgaagaaaatcgctgaccaagtaattcccaagcaaagagctgcccagtttgatgtagtt
aagcacatgcggcaagatcagatcaccaacggtatggtgaatgccatttcgaccggaaat
tggtcattgaagagattcaagatggatcgacagggtgtgactcaagtattgtcacgcttg
tcctatatctctgctttggggatgatgacaaggatttcttctcagtttgaaaagaccagg
aaagtgagtgggccccgatctctgcaaccatctcagtggggaatgctgtgcccatcagat
actcctgaaggagaggcctgtggcttggttaaaaacttagcactgatgactcacatcact
actgacatggaagacggccctattattaaattagctggtaaccttggagtagaagatgta
aaccttctgtgtggagaggaactttcatatccaaacgtgtttcttgttttccttaacggt
aacatccttggtgttattcgagatcatcagaaactggtctacacattccggctaatgcgt
agagcaggctatatcaatgaatttgtttcaatctccacaaatcttgcagacagatgtgtc
tatatttctagtgatggtggaaggctatgtaggccctatattattgtgaagaagcaaaaa
ccctctgtaacagaaaagcacatggaagaactggcacaaggttataggaattttgaagac
tttttacatgaaagccttgttgaatatttggatgtgaatgaggaaaatgattgcaacatt
gcactctatgaacatacaatcaataaagagacaacacacttggagattgaaccttttact
cttcttggagtctgtgctggtctcattccatatccccatcataaccagtctccaagaaac
acttaccagtgcgctatgggaaagcaagctatgggtaccattggctacaatcaaaggaat
aggattgatacccttatgtatctgttagcttatcctcaaagaccaatggttaagacaaaa
acaatagaactcattgagtttgaaaaactgccggctggacagaatgcgacggttgctgtg
atgagttacagtggttatgacattgaggatgctctggttttaaacaaggcttctttagac
cgaggctttggaagatgccttgtgtacaaaaatgctaagtgtactctcaagcgttacaca
aatcaaacatttgataaagtaatggggcccatgctggatgcgggaacacgtaaaccgatt
tggcgacatgaaattttagatgctgatggtatttgctctccaggtgagaaagtggaaaac
aagcaagtgcttgtgaataaatcgatgcccacagtgacccaaacccctctggaagggagc
agcgcatctcagcaatctcagtataaagatgtgccagtaatttacaaaggtgcaactgat
tcgtacattgaaaaggtcatgatatcttccaatgcagaagatgcttttttaatcaaaata
ttactaaggcaaactaggcgcccagaaattggagacaagtttagcagtcgtcatgggcaa
aaaggagtctgtggactgattgtacctcaggaagacatgccattttgtgattcaggaatc
tgtcctgatatcattatgaatccccatggcttcccatcacgtatgacggtaggaaaactc
attgaacttctggcaggaaaagctggagtccttgatggcagatttcattacggaacagcg
ttcggtggcagtaaagttaaagacgtatgcgaagatcttgttcgttatggctataactat
ttggggaaggattacgtaacatctggcatcacaggggaacccttagaagcctatatctat
tttggccccgtgtattatcagaaactgaagcacatggtgctggacaagatgcatgcaaga
gctagaggacccagagcagttcttaccaggcagcccactgaaggccgatcccgcgatgga
ggactacgtctgggagaaatggaaagagattgcttgataggttatggagccagcatgctg
ttgttggagaggcttatgatttcaagcgatgcatttgaagtagatgtatgtggccagtgt
ggattactgggctactctggctggtgccattactgcaaatcttcatgccacgtctcttct
ctccgtataccatatgcgtgtaagcttctattccaagaacttcaatctatgaacattata
cccagattaaaattgtccaagtacaatgaataa
DBGET
integrated database retrieval system
