Thamnophis sirtalis (common garter snake): 106552435
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Entry
106552435 CDS
T06107
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106552435 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106552435 (CNOT2)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106552435 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106552435 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106552435
NCBI-ProteinID:
XP_013926181
UniProt:
A0A6I9YPU8
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGASLYGQQS
ALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPRNMM
NHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQ
AFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVG
MVTKPANEQTQDFSIHNEDFPALPGSNYKDPTSSNDDSKPNLNTSGKTSSSADGPKFPGD
KSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGS
DLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYG
EDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYY
FFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcttcaagaaagaagtttgtagagggggtcgacagtgactaccatgatgaa
aatatgtactacagccagtcatcgatgttcccacatcgatcagaaaaagatatgctggca
tcaccatcaacatcaggtcagctgtctcagtttggggcaagtttatatgggcaacaaagt
gcactaggccttccaatgagggggatgagcaacaatacccctcagttaaatcgcagctta
tcacaaggcactcagttaccaagccacgtaacaccaacaacaggggtaccaacaatgtca
cttcacacgcctccatctccaagcaggggtatattgcctatgaatcctaggaatatgatg
aaccactcccaggttggtcagggcattggaattcccagcaggacaaacagcatgagcagt
tcaggtttaggcagtcctaatcgaagttcacccagcataatttgtatgccaaagcaacaa
ccctctcgacaaccttttactgtgaacagcatgtctggatttggaatgaataggaatcag
gcatttggaatgaataactctttatcaagtaatatttttaatggaacagatggcagtgaa
aatgttacaggactggatctttcagattttccagcactagcggacagaaatagaagggaa
ggaagtggaaatccaactccattaataaaccctctagctggaagggcaccctatgttggg
atggtaacaaaaccagcaaatgagcaaacccaggacttttcaatacacaatgaagatttt
ccagcattaccaggctccaactacaaagatccaacatcaagtaatgatgacagtaaacct
aatttgaatacatcaggcaaaacatcatctagtgcagatggtccaaaatttcctggagat
aaaagttcaacaacgcaaaacaataaccagcagaaaaaggggattcaggtgttacctgat
ggtcgggttaccaacattccacaagggatggtgacagaccagtttggaatgattggtttg
ttaacattcatcagggcagcagagacagaccctggcatggtacatcttgcattaggaagt
gacttgacaactttaggtctcaatctcaattctcccgaaaatctttaccccaaatttgca
tcaccttgggcttcttcaccctgtcgacctcaagacatagacttccatgttccttctgaa
tacttaacaaatattcacattagggataagttggctgcaataaagcttggtcgctatggg
gaagatctactcttttatctctattatatgaatggaggagatgtattacaactattagca
gcagtagagctatttaatcgagactggagataccacaaagaagagagagtatggattacc
agagcaccaggcatggagccaacaatgaaaaccaatacatatgagaggggaacatactat
ttctttgattgtcttaactggagaaaagtagcaaaggagttccatctggaatatgataaa
ctagaagaacggccccatctgccatctactttcaactacaaccctgctcagcaagccttc
tga
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