Thamnophis sirtalis (common garter snake): 106552445
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Entry
106552445 CDS
T06107
Symbol
ESR1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
106552445 (ESR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106552445 (ESR1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tsr03310
]
106552445 (ESR1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
106552445 (ESR1)
Nuclear receptors [BR:
tsr03310
]
3. Estrogen like
3A. Estrogen receptor
106552445 (ESR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
ESR1_C
zf-C17orf113
RNA_pol_Rpb4
Motif
Other DBs
NCBI-GeneID:
106552445
NCBI-ProteinID:
XP_013926205
UniProt:
A0A6I9YRE1
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MTSTNERGNLSMESTKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPAT
NQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRIVKHKRQREEHDSRNIGTVAE
ARSPNLWPSPLMIKHSKKNSPALSLSADQMVSALLEAEPPIVYSEYDPNRPFNEASMMTL
LTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWRSVEHPGKLLFA
PNLLLDRNQGKCVEGMVEIFDMLLATSSRFRSTNVQGEEFVCLKSIILLNSGIYTFLSST
LKSLEEKEHIHRVLDKITDTLMHLMAKSGLSQQQQHRRLAQLLLILSHIRHMSNKGMEHL
YNMKCKNVVPLYDLLLEMLDAHRLHAPAARNTPPNEEEISNQLAMAPASMHSLPPCYVNK
QEEEPVQEAV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgactagcaccaatgaaaggggaaacctgtctatggagtctaccaaggagacccgctat
tgtgctgtttgcaatgattatgcctctggctaccattatggggtttggtcctgcgagggc
tgcaaagccttttttaaaaggagcattcaaggtcataatgactacatgtgccctgctacc
aaccagtgtaccattgacaagaacagaaggaaaagctgccaggcttgcaggctccgaaaa
tgctatgaagttggaatgatgaaaggtggaattcgaaaagatcgcagaggtggccgaata
gtgaagcacaaacgtcaaagagaagaacatgatagcagaaacataggcacagtagcagag
gcaaggagcccaaatctttggccaagcccactaatgatcaaacatagtaaaaaaaacagt
ccagccctctccctctctgcagatcagatggtttctgctttgctagaggcagaacctcct
attgtctattcagaatatgaccctaacagacccttcaacgaagcttcaatgatgacgttg
ttgaccaaccttgctgatcgagaactggttcatatgatcaactgggccaaaagggttcca
ggctttgtggacttaacactccatgatcaagttcatctactagaatgtgcctggttagag
atattgatgattggcctagtgtggagatctgtggagcatccaggaaagctgctgtttgcc
cccaacttattgctggacaggaatcaaggaaaatgcgttgaaggcatggtagaaatattt
gacatgctgctggccacttcttctcgttttcgtagcacaaatgtccagggggaagaattt
gtatgccttaaatctatcatcctactcaattctgggatctacacatttctttctagcacc
ttgaaatccctggaggaaaaagagcatatccatcgtgttctggataaaattaccgatact
ttgatgcatttaatggccaaatccggcctttcccagcagcagcaacataggcgcttggct
cagcttctcctcatcctttcccacatcaggcacatgagcaataaagggatggagcacctc
tataacatgaagtgcaagaatgtggtcccactttacgatttattgctggaaatgctggat
gctcaccgtctgcatgctcctgcagctaggaacacaccacccaatgaagaggagatttca
aaccagctggccatggcacctgcttcaatgcattccttaccaccttgctatgtgaacaaa
caggaagaagaacctgtgcaagaagcagtctga
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