Thamnophis sirtalis (common garter snake): 106552459
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Entry
106552459 CDS
T06107
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106552459 (ZC3H12D)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106552459 (ZC3H12D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
UBA_N4BP1
zf-CCCH_2
zf-CCCH
RuvA_C
Motif
Other DBs
NCBI-GeneID:
106552459
NCBI-ProteinID:
XP_013926222
UniProt:
A0A6I9YPK3
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MEAQQNKLEFFHKLGYSKKEVCKVLEKLGQEASENDLLQELILMGKRPRENQSEAQCFQP
NLAAHGLPGPLPFPQGSTEEPNEASDHLRPIVIDGSNIAMSHGNKEVFSCLGIQLVVDWF
KQRGHQYIKVFVPSWRKEQSRFDTPVTDPHILESLAKQAILIYTPSRKIKGKRMMCYDDR
YIVKLAYEQDGVIVSNDNFRDLQNENPEWKWFIEQRLLMYSFVNDKFMPPDDPLGRHGPS
LDNFLSRKPLFPESRWQLCPYGKKCTYGIKCKFYHPERLNWDHLSVADELRVKAKTYLSG
QKTEEEKGTNPTKNKSGHPSSLYSPRSTINRNSTALSSEVIHTSVPQQIGEYQMDSANNW
ANMYQDSYQVPLTLLQHGQTGYAVAEAEQFTASSLTARTYSGNTLGRPAKYEALVGESPR
DHYLRYSQGPLLSHHNRCLDCPCLEMCNFQGCCRKQASAIQTLQTPSFLARQISKAQSNE
EQDSIDSSAEVFSYSKYGEMGHIGHLQTRPYDQLFLLNSNLLRRYNCPSGVESQQNLAQT
PFSQEQANVQQPLRFTFPYFQENQALISSNTDIVRNFIPLARKHGNLHSRFPNRKPW
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccagcagaacaagcttgaattcttccataagctgggctacagcaagaaggag
gtgtgcaaagttctagagaaattaggtcaagaggcttcggagaatgatttgctgcaagaa
ttgatcctcatggggaagagacctcgggagaatcagagtgaggcacaatgttttcaaccc
aatcttgctgctcatggactaccagggcccctcccatttccccagggctctactgaggaa
ccaaacgaggcatctgatcatttgagacctattgtaatcgatgggagcaacattgcaatg
agtcatggaaacaaagaagtattttcatgcttaggaattcagctggtggtagactggttc
aaacaaagaggccaccagtatatcaaagttttcgttccatcttggagaaaggaacagtct
cgatttgatacccctgttacagatccacatatccttgaaagcttggccaagcaagcaatt
ctcatctacacaccatcccgcaaaataaagggcaaaagaatgatgtgctatgatgatcgc
tacattgttaaattggcctatgaacaagatggggtcattgtttccaacgacaactttcga
gatctgcagaatgaaaaccctgagtggaaatggttcattgagcagcgactgctcatgtat
tctttcgtcaatgacaaattcatgccacctgatgatcctttgggccgacatggaccttct
ctggataattttctaagtagaaaacctcttttccctgaatcaagatggcagctctgtcct
tatggcaaaaagtgcacatatggcatcaagtgcaaattttaccacccagaaagactgaac
tgggaccatctctctgtagctgatgaactccgggtcaaagctaaaacctacttgtcgggt
caaaagactgaagaagagaagggaacaaaccccacgaagaataagagtgggcatccatca
tctctatatagtcctagaagtactattaaccgaaacagcacagcactcagctcagaagta
attcacactagtgtcccacaacagataggagagtaccagatggattcagctaacaactgg
gcaaacatgtatcaggacagctaccaggttccattaactttattgcaacatggtcaaact
ggatatgcagtagcggaagccgaacaattcactgcatcttctctaactgccaggacgtat
tctggaaatacacttggaagacctgcaaaatatgaagccctagtaggtgagtcccctagg
gaccattatctcagatacagccagggtccacttttgtctcatcacaaccggtgcttggac
tgtccatgtttagaaatgtgtaacttccaggggtgttgtagaaaacaggcatcagcaata
cagaccttacaaacaccttcctttttagcaaggcagatctcaaaggcccagtccaatgaa
gaacaggattctatagattcttcagctgaggtattttcatatagcaagtatggggagatg
ggtcacattggacatttgcaaactagaccttatgaccaattatttttgttaaattccaac
ttgctcagaagatacaattgtccttctggtgtggagtctcagcagaatttggctcaaact
ccattttctcaagagcaagcaaatgtccagcaacccctaaggtttacgttcccatatttt
caggaaaaccaagccttaatttcctccaacacagacatagtgagaaattttataccatta
gctaggaagcatgggaatcttcatagtaggttccctaataggaaaccatggtga
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