Thamnophis sirtalis (common garter snake): 106552460
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Entry
106552460 CDS
T06107
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106552460 (NUP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106552460 (NUP43)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106552460 (NUP43)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106552460 (NUP43)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106552460 (NUP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_DCAF4
Beta-prop_SCAP
KNTC1_N
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
106552460
NCBI-ProteinID:
XP_013926226
UniProt:
A0A6I9YPZ4
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MDMQFLDQERIVAASSTGSVTIFRHHQNNQTLSINQKWEQAHYYDHSWGSASCTGIICNS
PEIFSIGEDGRINMFTTDRKEAVRTIDNADSSTLQAVTRLRTTEILTVNSIGQLKIWDFR
QQGSEPSQIFSLTGERVPLHCVDRHPNQQHIVATGSQDGMLSIWDVRQGSMPVSLLNAHQ
AELWEVHFHPSNPDHLFTCSEDGSLWHWDASSDVTERKSFLHTSGRNTSFLPHSMANQSI
ISAWLNNDPTKDRIEITNLSSNSTLSINSLDVLGSFLVYGTDTESIYVKKDLFV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcagtttttggatcaagagagaattgttgctgcttcatctactgggagtgtg
accattttccggcatcatcaaaataatcagactctttccataaatcagaaatgggaacaa
gcacattattacgatcactcctggggaagtgcatcatgcactgggatcatttgcaatagc
cctgaaatttttagtattggagaagatggtaggataaacatgttcaccactgatcgtaag
gaagctgtacgtactatagataatgctgatagcagtacactccaagcagtgactcgactt
cgtacaacagagattctgacagtcaattccattggtcagctaaaaatatgggacttcaga
cagcaaggaagtgaaccttcacaaatattttcattgacaggggaaagagtaccactacat
tgtgtcgataggcatcccaatcaacaacatattgttgctacaggtagtcaagatggaatg
ttgagtatttgggatgtaagacaaggcagcatgccagtttccttactaaatgctcatcaa
gcagaattatgggaagtacactttcatccttccaatcctgatcatttgttcacttgttca
gaagatggatctctgtggcattgggatgcttcctctgatgtgactgaaagaaaatctttt
cttcatacaagcggaagaaatacttcatttctacctcattctatggctaatcagtccata
attagtgcatggttgaacaatgatcctactaaagatcgcattgagattacaaatttaagt
tcaaattcaactttatcgataaacagtttagatgtgttaggatcatttcttgtgtatgga
actgacacagaatctatttatgttaagaaggatctctttgtatag
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