Thamnophis sirtalis (common garter snake): 106552494
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Entry
106552494 CDS
T06107
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
106552494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
106552494
NCBI-ProteinID:
XP_013926262
UniProt:
A0A6I9YPP4
LinkDB
All DBs
Position
Unknown
AA seq
3098 aa
AA seq
DB search
MAEPPRYLRRRSRESSGAALLFLLSILAALGTTQPDSDGPSLLLQPSKPGAADGAAAGIL
VANRGLRVPFGRSVSLDPAHDLVIRVQPGDKCVVTVLGSGLPPAPHRPGALSPQRFPCAF
GPGEVTYTHYGSRSPGRDRLSLQLRYDSPSRTSVVPFALEVEVLSQQLRLLSRNLPLAVE
KLRGLSQPLDAKVLAFSEEGEAARRHCRLTALPHPSSSGNHLPSYGRLIDARGRPLPPGY
SNDCRRFLSEDIRYQHTAPTPSPNRDYIPMRVEVLKDSGSPESLSQQEYFQVVVRIRDGA
ENTPPKPSFVALLMMEVDQFVLTAITPDMLAAEDLETPSDLLLFNLTSPWLSVGGQDDTT
GYLLSTDDPSRPLTSFTQRELRELKIAYQPPTVDSDHERLFQFEMEVLDPEGASSDPFAF
MVVVKPMNTLAPVAVFNRISGPQMMLFEGQSRPLSDNLVISDEDNLGEVKIWVTKGLKHG
ELRVLGASPGRHFFTAAELEAGQVIYQHDSSEDSFSDNIIFRMEDGQHQVEFFYPITIIP
DDDQPPLLNANTGLVLSEHQVVQISPFVLSATDIDSDDSTIQFVVKEVKKSSGIPVRKHL
GELLLRQEEVPSAYEKEEGMEEDQSDPSHWHFIDSEGMYEKVVTEWLQEDILDGKLFYRH
IGPHSTNVVMDQFVFYLQDDNDPPNQSEEQVFIIKIQPVDNLSPELYPGTTLQMTVLEYQ
VTHFKKHYLCYTDLDTDDRELKYTVLTSPTDIDENHPVLAGEIVLTDSPLVPITHFTQAQ
INHHKVAYRPPDQELGITPRIAQFTYSVEDTAGNSVLGIFTFFLQPVNNQPPQITNAGFT
VFEGHSFFLTTTQLDATDKDTDTDRIVFTLTEAPQHGHLRYLEEGLMLQGESFLLDDIAN
GRISYQHNGDEYRNDSFQLEVSDEVHQVPITVKIAVQPVDDERPSIMVPSSNGLLGAFID
VLENSVTEITTSLIQGTDEDTDELALTFIVEDPPKLGSILVDGVPSKRFTQEDLISGTVV
YAHNSGEIGLKRQTDSFNLTISDQSSDWVVRGSTIEGVRVTVTLLPVDNIAPEVMLGEEP
FTVHEGGKNVLRLELLDVEDIDTPRDDILCTILTQSTAGYLENISPAPGSEKSRAGIPIS
AFSIKDIRVGHINYVQSIHKGIEPLEDRFTFQCSDGINFSPPQFFPIIIIPTNDEKPELF
VREFVVLEGMSLVIDTPILNGADADIPPDELRFFITVPPKYGQIVNQLVTGTVSVTNFTL
EEIQEASSIVYEHDDSETKEDFFKIQLTDGLHTVEEEVLIMVILVDDETPRMSINGGLEV
DVGESKVITNQDLKATDIDSEDRMLTYIIRLSPRHGLLQHISKEKEVLYNITLGMNFTQD
DIDHKFICYTHTGQQGLRDLIKFDVTDGINPLIDRYFYITINGIDMVFPEVINKGVTLKE
GGKVTLTTDLLSTSDINSPDELLKFSITRAPSRGHLENSDNPGVLVTTFTQLQLAGNKIY
YIHTADDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTLHDLTVQEGETKLITP
FELNVDDRDTPDHVLHFIITQVPVHGQIIYNNSYSVTSFTKQDLNENMISYKHDGTETNH
DSFSFTVTDGTHPDFYVFPDTILETRNPQMMKIQINALDNGIPQIVVNKGVSTLRNIATG
HLGFLITSKSLKAEDRDSPHKLLKYKITDGPKHGFLINIGLGNASVKSFSQADIDEMKIC
YALKEHENATSDIFYFSVEDNGIGTKDGTAEKDKDFRGKAQKQVQFNPGQTVATWRVRII
ADNKYEESETFQIILSDPVMAALELPEKAVVEIIDPGDESTVYIPDSEYRVEEDVGELLI
PIRRSGDTSHELMVVCYTHQGGNRLKNQPFRLNWAWISLEKEYYMIDEDSKVLEVTLKRR
GYLGETSFVKPAFYFGDTDYYVAESAGYVEVRVWRTGTDLSKSATVTVRSRKTEPVSAEA
GVDYVGISQNMDFAPGVNMQTFRATILDDLGQPVLEGPEKFELVLQMPVNAVLGKPSKAT
IIINDTITDLPKVQFKEPLYIVNEKDGQVEAVISRSGDVNHKSTVRCYTRQGSAQVMMDY
EERPNTDDSVITFLPGEIEKPCVVVLEDDAIYEEEKEFRLVLGTPKSTSSFGASIGEIKE
VLVKIKDEEDKPMIKFSEVKYNIQEPGEPGEIAVLKIPILRLGDTSKISIVRIHTKDGSA
TSGEDYNPMSEDIEFKEGETEHFVEVEVLYDGVREMREAFIVHLKPDENMVAETQTNKAI
IYIEEMDSMADVTFPAVPQVVSLLLYDDTAKSRINPQPPNGYPIVCVTACNPKYSDYDKT
GSICAAENINDTVTLYRWLVSAPSGMDGVTSPMREVDSNTFFTNTKSIALDSIYFQAGSR
VQCAARAVKANGDVGLELLSPIHVINREEGLCQPRILGTVGAEPFSAKIHYMGPDDPDYP
NLIRFSVTMPHIDGMLPVISTRPLSNFELTLSPDGTRVGNHKCSNLLDYNEIETKHGFIT
DDIKNPEVIGETSSYQYSSSIRSAKTLRFYRNLNLEACLWEFISYYDMSELVTSCSGSIG
TDGQVLNLVQSYVTLRVPLYVSYVFHSPAAVGGWQHFDLQSELRLTFVYDTAILWKDGIG
SPPEAELQGSLYPTSMQINDEGRLVVHFRTEIRFRGQFIISHPGTSLTSMVMSSDHPGLT
FILNLSQSEQTFNQPMQQWKFLSDFAVRDYSGTYTVKLIPCVATPSQEYTQPVICSPREP
ITFDLDIRFQQVSDPVAAEFNLNTQMFLLSKKDLWLSDGSLGFGEETDVSFTEGSEIYGR
IMVDPVQNLGESFICNIEKVFLCTGADGYVPKYNPSNKEYGCLADSSSLLYRFKILDKAQ
PDTQAKMFGNMAFHAKLAVDHIDGHPLVKQPGSDGFSLLSTPLFQVAVGREWYIHTIYMV
RSRENVHKGFGKRSIEYHHVLSCNNSTSHLSRSRRAVSDIPALAQDIGADKNRGTNIQHI
VLDRSSKITLKQREWSPAGKPYEKPVLQIPGSNAEDKIIPIIGGAIGLLLLLCTVIIIIL
LLKRKGHSTDRKTSSFTNHSKSNETVTTQQSNSDSSEV
NT seq
9297 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcccaggtaccttcgccgccgcagccgggaatcctccggggcggcgctg
ctcttcctgctctctatcctggctgcgctcgggaccacccagccggactcggacgggccg
tcgcttctccttcagccgtcgaaaccgggcgctgccgacggggccgccgcagggatcttg
gtggccaaccgcgggctgcgcgtgcctttcggccgctccgtttccctggaccccgcccac
gacctggtgatccgcgtgcagccgggcgacaagtgcgtcgtgaccgtcttggggagcggg
ctgccgcctgcgcctcaccgcccgggggcgctctccccgcaacgcttcccctgcgccttc
ggtcccggcgaggtgacctacacccactacgggtctcgcagccccggccgtgaccgcctc
agcctccagctccgctacgactcccccagccgcacatccgtggtgcctttcgcgctggag
gtcgaggtgctgtcgcagcagttgcgcctcctcagccgcaacctgccgctggccgtggag
aagctgcggggcctcagccagcccctggacgccaaagtcctagccttctccgaggaggga
gaagccgcgcgtcgccactgccgcctcaccgccctccctcacccgtccagcagcggcaac
cacctgccttcctacgggcgcttgatcgacgcccgcgggcgccccctgccgccgggctac
agcaatgactgccgccgcttcctcagcgaggacatccgctaccagcacacggctcccacg
ccctcccccaaccgcgactacatccccatgcgggtggaagtgctgaaggacagcggatct
cccgagagtctaagccagcaggaatactttcaggtggtggttcggatccgggatggggct
gagaacacgccccccaagcccagctttgtggctttgctcatgatggaggtggatcagttt
gtgcttaccgccatcacccctgacatgttggctgcggaggacttggagaccccctcagat
ctgctgctatttaatctcacctctccctggctcagtgttggagggcaggacgacacaact
ggttacttgctaagtacggatgatcctagtcgtccactcacttctttcactcagcgggag
ttgagggagctgaagattgcctaccagcctcctacagtggactcggaccatgagcgcctt
ttccaatttgagatggaggtgttggaccctgagggtgcctcttcagacccctttgccttc
atggtggtggtgaaacctatgaacactttggctccggtggctgtctttaatcgcatttct
ggccctcagatgatgctttttgaaggccagtcaaggccgctttccgacaatcttgtaatc
agtgatgaggacaacttaggggaagtgaagatttgggttacaaaaggtctaaaacatggt
gaactgagagttttgggtgcatctcctggtcgtcatttctttactgcagcagagttggaa
gctggacaggtgatctaccagcacgacagcagtgaggacagtttcagtgataacattatc
ttccgcatggaggatggacaacaccaggtggagtttttttatccaattacaatcatccct
gatgatgatcaaccaccactccttaatgccaacactggcttggtcctcagtgagcaccag
gtagtgcagatctcaccctttgttcttagtgctactgatatagattctgatgactcaact
attcaatttgttgttaaggaggttaaaaagtcttcaggtatacctgttcggaaacatttg
ggtgagcttctattgcgtcaggaagaggttccatcagcctatgaaaaagaagaaggtatg
gaagaagatcagagtgatccatcccactggcactttatagacagtgagggtatgtatgag
aaggtagtgactgaatggctgcaagaggatatcctggatggaaagttgttctacaggcat
attggacctcatagcaccaatgtagtgatggaccagtttgtattctatctccaagatgat
aatgaccctccaaatcaatctgaagaacaggtgtttatcatcaagatacagccagtagat
aacttatctccagaactatatccagggacaactttacagatgactgtcctggaatatcaa
gtgacacatttcaagaagcattatctgtgttatactgatttggacacagatgatagagag
ctgaaatatacagtgcttacatcaccaactgacattgacgaaaatcaccctgtcttggca
ggtgaaattgtattgactgacagccctctggtgcccattacccatttcactcaagcacag
ataaatcatcataaagtggcctatagaccaccagaccaagaacttggcattactccaaga
atagcacaattcacttacagtgtagaagatacagctggtaattccgttctaggtattttc
actttctttttgcaaccagtgaataatcagcccccacaaataaccaatgctggtttcact
gtgtttgaggggcacagtttctttctcaccactactcagctagatgctactgataaagat
acagacactgatcgaattgtcttcactttaactgaagcacctcagcatggccacctgcgt
tacttggaggagggattgatgctacagggtgaatcttttctcttagatgacattgctaat
ggtcgcatatcctatcagcataatggtgatgagtacagaaatgattcctttcaattagaa
gtaagtgatgaagttcatcaagtaccaatcacagttaaaattgctgttcaaccagttgat
gatgaacgtcccagcatcatggtccctagtagtaatggacttttgggggcctttattgat
gttctggaaaatagtgttactgaaataactacttctcttatccagggcacagatgaggat
actgatgaactggcattaacttttattgtagaggacccccctaagctgggtagtatttta
gtggatggagtaccctctaaaagattcactcaagaagatctcataagcggaacagttgtt
tatgctcacaatagtggagaaattggattgaagaggcagactgattctttcaatcttact
atctcagatcagtccagtgactgggtggtgagaggaagcacaatagaaggagtacgtgtg
actgtaactcttttgccagtggacaacattgctccagaagttatgttgggagaagaacca
ttcactgttcatgaaggaggaaaaaatgtgttaaggttagaactgctggatgtggaagat
attgatactcccagagatgatattctctgtaccattctaacacagtcaactgctggatat
ctagagaatatctctccagcaccaggatctgaaaaatccagagctgggattcccatcagt
gcattttctatcaaagatattcgtgttggtcatatcaactatgttcagagcatccataag
gggatagaacctttagaagacagattcactttccagtgctctgatggtatcaacttttca
ccacctcagttctttccaattatcatcatcccaaccaatgatgagaagccggaattgttt
gtacgtgagtttgtggttttggaaggaatgagcttggtaattgacacacccattctcaat
ggtgctgatgctgatattcccccagatgaattgcgcttctttataactgttcctccaaag
tatggacagattgttaatcagctagttacaggtactgtgtctgttaccaatttcactctg
gaagaaattcaggaagcatctagcattgtgtatgagcatgatgactcagaaactaaagag
gactttttcaaaatccagctcactgatggcctacacacagtggaagaggaagtgttaata
atggtcattttggttgatgatgaaacaccccggatgtccatcaatggtggattagaagta
gatgttggtgaatctaaagttatcaccaatcaagatctcaaagctactgacatagactca
gaagacaggatgcttacttatattattcgtttatcccccaggcatggcttactacagcat
ataagtaaagaaaaagaggtgctatacaacattacacttggcatgaatttcacacaggat
gacatagatcataaatttatatgttatacacatacaggccaacagggactccgggactta
attaaatttgatgtcactgatggcatcaatcccttgatagacagatatttttacattact
atcaatggcattgatatggtgtttcccgaggtgatcaataaaggagtcactctgaaagaa
ggagggaaagtgactctcactactgatctcctcagtacaagtgatatcaacagccctgat
gaactacttaagttcagcatcacccgggcaccaagcagaggtcatttagagaattctgat
aaccccggagttcttgtcactaccttcactcagcttcaactagctggaaacaagatttat
tacatccacactgcagatgatgaagtgaagatggatagctttgagtttgaagtgactgat
ggctataatccagtcttccgtacttttagagtttctattactgatgtagacaataagaaa
ccagttctcacattacatgacctcacagttcaagaaggggaaaccaaactgatcacacca
tttgagctaaatgtggatgatcgggatacacctgaccatgtactccatttcataattacc
caagtccctgtacatggtcaaattatttataacaacagctattctgtcaccagcttcact
aaacaagacttaaatgaaaatatgatcagctacaaacatgatggcactgaaactaatcat
gacagcttctctttcactgtaacggatgggacacatccagatttttacgtttttcctgat
accatccttgaaacacgtaacccacagatgatgaaaatccagatcaatgctttagacaat
ggaataccacaaatagtagtgaacaagggtgtctccacactgagaaatatagcaactgga
cacttgggcttcctaataaccagcaagtctttgaaagcagaagacagagatagtccacac
aaattattgaaatataagatcacagatggaccaaagcatggatttctcattaatattggt
ctaggaaatgcaagtgtcaaatcattttcccaagctgatatagatgaaatgaagatatgt
tatgccttgaaagaacatgaaaatgctacgagcgatatcttctatttttcagttgaagat
aatggcattgggactaaagatggaacagcagaaaaggataaagatttcagaggaaaagct
cagaaacaggttcagtttaacccaggacagactgtggctacttggcgagtaagaataatt
gcagataataaatatgaagaatctgagaccttccagattattttgtcagatccagttatg
gctgccctggagttgccagaaaaggcagtggtggaaatcattgatcctggtgatgaatct
actgtgtatattcctgactcagaatatagagtagaggaagatgttggtgagctgttaatc
cctatcaggagatctggagatactagtcatgaactaatggttgtttgttacactcatcaa
ggaggaaatagattgaagaatcaaccttttcgtttgaactgggcttggatttcattggaa
aaagaatattacatgatagatgaggattccaaggttctggaggtaaccctgaaacgcaga
ggatatctgggggaaacttcatttgttaaacctgctttctattttggtgacactgactat
tatgttgctgagagtgctggttatgtagaagttcgtgtttggagaactggaacggacttg
tctaaatcggccactgtcacggtgcgttccaggaaaactgaaccagtgtctgcagaagct
ggagttgattatgttggcataagccaaaacatggattttgctcctggtgtaaacatgcag
acttttcgtgctactattttggatgatctaggacaacctgttcttgaaggcccagaaaag
tttgaactcgttctccagatgccagtgaatgcagtgcttggaaagccaagcaaagctact
atcatcataaatgataccatcactgatttacccaaagtccaatttaaggaacctctctac
attgtgaatgaaaaagatggtcaggtggaagctgtaatctcacgaagtggagatgttaat
cataagtctactgtccgctgttacactcgccaaggctctgcccaggttatgatggactat
gaggagagaccaaacacagatgattcagtaataacattcctaccaggagagatagagaaa
ccctgtgttgtggttttggaagatgatgctatctatgaagaggagaaagagttcagactg
gtgcttggaactccaaaaagtacctcttcatttggtgcttccattggggagataaaagaa
gtactggtgaagattaaggatgaagaggacaaaccaatgattaaattctctgaggtgaaa
tacaacattcaagaaccaggggagcctggagagattgcagttttaaagatcccaatcttg
cgacttggagatacttccaaaatttccattgtaagaattcatactaaagatggttcagct
acttctggagaagactataatccaatgtctgaggatattgaatttaaagaaggagaaaca
gagcactttgtggaggttgaagttttgtatgatggagtgagagaaatgcgtgaagcattt
atagtgcatttgaaacctgatgagaatatggtggctgagacacagacgaataaagccatt
atatacattgaagaaatggatagcatggcagatgtgactttcccagctgtgccacaagtt
gtatcacttctgttgtatgatgacactgccaaaagcagaataaatccccagcctcccaat
ggatatcctattgtgtgtgtaacggcatgcaatcccaaatactcagattatgacaagact
ggatctatttgtgctgctgaaaacatcaatgacacagtgaccttgtatcgttggcttgtc
agtgccccaagtggcatggatggtgtgaccagtcctatgcgtgaagtggattccaatact
ttcttcactaataccaagtcaattgctttagactccatctatttccaagctggctccagg
gttcagtgtgcagcacgtgcagtcaaggccaatggtgatgtgggtttagaactgttgagt
cccattcatgtaataaatagagaagaaggtctgtgccaaccacgtattctgggtacagtt
ggagcagagcctttctcagccaaaattcattacatgggtcctgatgatcctgactatcca
aacctgatcaggttttcagttaccatgcctcatatagatggaatgttgccagtaatctca
accagacctttgtcgaattttgagttgacactgagcccagatggcactcgtgtaggaaat
cacaaatgctccaatctcttggattataatgaaattgaaacaaaacatggcttcatcaca
gatgatatcaagaatccagaagtgattggagaaacttcatcctatcaatacagcagtagc
atacgatcagctaaaactttacgtttctaccgtaatctcaatctggaggcctgcctatgg
gaatttatcagttattatgatatgtcagaactggtaaccagctgtagcggctccattggg
acagatggtcaggtgttgaatctggttcaatcgtatgtcactcttcgagtgcccctctat
gtatcttatgtcttccattcgcctgcagcagttgggggctggcaacattttgacctgcaa
tctgagttgaggctcacttttgtgtatgatactgccattctatggaaagacggtattgga
agtccaccagaagcagaactgcaagggtctctttacccaaccagtatgcaaatcaatgat
gaagggcgattggtggtccatttcaggacagaaattcgattcagggggcaattcataata
tcccacccaggtacttctctgacttctatggtgatgtcatctgaccatcctggccttaca
ttcatattgaacctttctcaaagtgagcaaaccttcaatcagccaatgcagcaatggaag
tttctttccgattttgctgtacgtgactattctggcacttacactgtgaaacttatccct
tgtgttgccacacccagccaagaatatacccaacctgtcatctgtagcccacgggagcca
atcacttttgatctagatatcaggttccagcaggtcagtgacccagtagcagctgaattt
aatctcaatactcaaatgtttctgctatccaagaaggatctgtggctgtctgatggttct
ctgggatttggagaagaaactgatgtctcatttacagagggttcagaaatctacggtcgt
atcatggtggatcctgttcagaatttaggggaatctttcatctgtaacattgagaaggtg
ttcttatgtacaggggccgatgggtatgttcccaagtataatccaagtaacaaagaatat
ggttgtctagctgactcatcttccctattgtacagattcaaaatcctggataaagctcaa
ccagatacacaagcaaaaatgtttggaaatatggcattccacgctaaactagcagttgat
cacattgatggacatcctttggtaaaacagcctggttctgatggattcagcttgctgtca
actccattattccaggtagcagtgggtcgagaatggtacatccataccatctacatggtt
cgatcacgtgaaaatgttcataagggctttggaaaaagaagtattgagtatcaccatgtt
ttatcttgcaataacagcacctcacatcttagtcgttctcggagagctgtttctgatatt
cctgctcttgcccaagatattggtgctgataagaatagaggaacgaatatccagcatata
gttcttgaccgatctagtaaaattaccctcaagcagagagaatggtctccagcaggtaaa
ccttatgaaaagccagtcctgcaaattccaggaagtaatgcagaagacaagataattccc
attattggaggtgcaattggactgctgcttcttctctgcactgttataattattatatta
cttctgaagcgaaagggacattcaactgatagaaaaacaagctcatttaccaatcattcc
aaaagtaatgaaactgtgactacacagcagagcaatagtgatagctctgaagtttaa
DBGET
integrated database retrieval system
