Thamnophis sirtalis (common garter snake): 106552607
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Entry
106552607 CDS
T06107
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106552607
Enzymes [BR:
tsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106552607
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
106552607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ResIII
SNRNP200_wHTH
Helicase_C
AAA_22
Helicase_PWI
AAA_19
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
106552607
NCBI-ProteinID:
XP_013926399
UniProt:
A0A6I9YR46
LinkDB
All DBs
Position
Unknown
AA seq
1656 aa
AA seq
DB search
MALPRLTGALRSFSNVTKQEDYSEESADITDKRAKLQEQLCNSDLTWKKIVTFVDENTLK
EQQQSVHGDLRTLFHAAKQIVGSENGEEAIESGASFLFKMLYAKDCIGRDETQAIKQVFG
PFPPSSATAACNAISRIVSHFTEEQLAALLQSSEELNSDSKLSFGRNIAFSFEMHDLDDF
EELLINGEMDDQKVISLDYEKIFNNQFEHYPNNCGENADAKSSGKVDDSFLWCEVGKYLN
DSLQGNNTGPTLEHLCCTLYEMLASHKSGDELQNELFELLGPEGFELIEKLLQNRITIVE
RSFSGPNDYRLQSLQEQCRKFTGENSKPNYGCQVTIQSEQEKQLMKLYRREEKRNARREK
RTGDEGEILVDAGMSFDPKELRMQREQALLNARTMPVLGRQRDMEFDKIHYPHVYDSQAE
ARKTSAFIGGSKMLLPEAIERENNKMYEEVKIPPSEQMPMGLVEKPVYIKDLDEIGQLAF
KGMKQLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHVQQGVIKKDEF
KIVYVAPMKALAAEMTNYFSKRLEPLGIMVKELTGDMQLSKSEILRTQMLVTTPEKWDVV
TRKSVGDVALSQLVKLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATL
PNYLDVATFLHVNPYIGLFYFDGRFRPVPLGQTFIGIKTTNKIQQLINMDEVCYENVLKQ
VTAGHQVMVFVHARNATVRTAMGLREKAKNNGHICYFLPTQGPDYGQSEKQVQKSRNKQL
REMFPDGFSIHHAGMLRQDRTLVESLFSRGYIKVLVCTATLAWGVNLPAHAVIIKGTQIY
AAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGVIITTHDKLSHYLTLLTQQNPIESQFL
ESLADHLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDPSLEKHRE
QLVIEVGRKLDKARMIRFEERTGFFSSTDLGRIASHYYIKYNTIETFNELFDAHKTEGDI
LAIVSKAEEFDQIKVREEEIEELEALLSNFCELAAPGGVENNYGKINILLQTYVSRGEMD
SFSLISDSAYVAQNAARIVRALFEISLRKRWPAMTYRLLNLSKVIDKRLWGWVSPLRQFT
VLPPPVLAKLEQKNLTIDKLKDMRKDEIGHMLHHVNIGLKVKQCVQQIPSISVEATIQPI
TRTVLRVRLNITPDFKWNDQVHGTGGEPWWIWVEDPTNDHIYHSEYFIIQKKQVIAKETQ
LLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPIT
ALGHPKYETLYKFTHFNPIQTQIFYTLYHTDSNVLLGAPTGSGKTVAAELAIFRIFNNYP
TTKAVYIAPLKALVRERIEDWKIRIEEKLGKKVVELTGDVTPDMRSIAQADLIVTTPEKW
DGISRSWQNRSYVQKVSVLIIDEIHLLGDERGPVLEVIVSRTNFISSHTEKPVRVVGLST
ALANAKDLADWLNINQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRS
HSPAKPVLIFVSSRRQTRLTALELIAFLATEDDPKQWLNMDEREMSAIISTVRESNLKLT
LAFGIGIHHAGLHERDRKTVEELFVNCKIQVCLLYA
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcctcgcttaacaggagctctccgttccttttcaaatgtcactaaacaagaa
gattatagtgaagaatctgctgacataacagataaaagagccaagttacaagaacagctg
tgcaattcggatctcacttggaagaaaatagtaacatttgttgatgaaaacacactcaag
gaacagcagcaatctgtacatggtgatttaaggacactatttcatgctgccaaacaaata
gtgggatctgagaatggcgaagaagcaattgaaagtggcgcttccttcctttttaaaatg
ctttacgccaaagactgtattggtcgtgatgagactcaagccattaagcaggtctttgga
ccctttcccccatcctctgccactgcagcatgtaatgccatcagtcggattgtttcacat
tttaccgaagaacagcttgctgctcttctgcaaagttctgaggagttaaacagtgattca
aagctgtcctttggcagaaatattgcattttcttttgaaatgcacgatttggacgacttt
gaagaattgctgataaatggtgaaatggatgaccagaaagtcattagcctggattatgag
aagatttttaataaccaatttgaacattatccaaataactgtggtgaaaatgctgacgcg
aagtcttctgggaaagtagatgatagtttcctgtggtgtgaagttgggaagtatctgaat
gattccctgcaaggaaataatacaggcccaacactggaacatctttgctgtactttgtat
gagatgcttgcctcccataaaagtggtgatgagcttcagaatgagttgtttgaattacta
ggacctgaaggatttgaattaatagaaaagctcctgcagaacagaattaccattgtggaa
cgatctttctctgggccaaatgattacaggctacaatctttacaagaacagtgcagaaaa
tttacaggagaaaattctaagccaaattatggctgccaagtcaccattcagtctgaacaa
gagaaacagctaatgaaattatatcgccgtgaagaaaaacgaaatgccaggcgagaaaaa
cgaactggggatgaaggggaaattcttgttgatgcaggaatgtcttttgatccgaaggag
ttacggatgcaaagagaacaagcgcttttgaatgctcgcacgatgccagttttaggcaga
cagcgagacatggaatttgacaaaattcattatcctcatgtttatgactcacaagccgaa
gctaggaaaacatcagcttttattggtggatcaaagatgcttttgccagaagctattgag
agagaaaataataaaatgtatgaagaagtaaaaatacctcctagtgaacaaatgccaatg
ggtttagtggaaaagccagtttatataaaggatttagatgagattggacaacttgctttc
aaaggcatgaaacaattaaaccgaatccaatccattgtttttgaaactgcctataacaca
aatgagaatatgctaatatgtgcacctactggggccggaaaaactaacattgccatgtta
acagttttgcatgaaatccgtcagcacgttcagcagggcgttatcaaaaaggatgaattt
aagatagtttacgttgctcctatgaaggcattggcagctgaaatgacaaattatttcagc
aaacgtctggaaccactgggcatcatggtgaaagagttgacaggtgacatgcagttgtca
aaaagtgaaattctccgaactcagatgcttgtaaccactccagaaaaatgggatgttgtg
accagaaagagcgtgggagatgtcgctctctctcaactagtgaagctccttattcttgat
gaggtacacctacttcatgaagatagaggtccggtactagaaagtttggtggcccgcact
ttacgccaggttgaatctacccaaagcatgattaggatcttggggctgtcagccacatta
cctaattatcttgatgttgctacatttctgcatgttaatccttatattgggttattttat
tttgatggtcgttttcgacctgttcctcttggccagacatttataggaatcaagacaacc
aataagatacagcagcttattaatatggatgaagtttgttatgaaaatgtgttgaagcaa
gtaacagctgggcatcaggtgatggtatttgttcatgctcgaaatgctacagtccgaacc
gctatgggtcttcgtgaaaaagctaaaaacaatggtcacatttgctactttttaccaact
caaggtcctgattatggacaatcagaaaagcaagtgcagaagtctagaaacaagcaatta
cgtgaaatgtttccagatggattcagtattcatcatgcaggaatgctccggcaagacaga
actttggtggaaagcttgttttctcgtggttacataaaagtcttggtttgtacagctaca
ttagcctggggtgtcaatcttccagctcatgcagtcatcattaagggaacacagatttat
gctgcaaaaagaggatcctttgttgaccttggaattttagatgtcatgcagatatttggc
cgagctggacggccccagtttgataaatttggagaaggtgtcattatcacaacacacgac
aaactcagtcattatctgactctgcttactcagcagaatccaattgaaagtcagtttctt
gaaagccttgctgaccatttgaatgcagagattgctcttggaacagtgacaaatgttgag
gaagcagtaaagtggataagttacacttacctttatgtacggatgagagcaaacccatta
gtatatggcatcagtcacaaagcttatcagatggatccaagtttagagaagcacagagaa
cagttggtgattgaagttggccgaaaactggataaagcccggatgattcggtttgaagag
agaactggatttttttcttcaactgatttaggcagaattgcaagccactactacattaaa
tataacacaattgagactttcaatgaactctttgatgctcataaaacagaaggtgacatt
cttgctattgtttctaaagctgaagaatttgaccaaatcaaggtgagagaagaagaaata
gaagagctggaagccttgctgagcaatttctgtgaacttgctgcacctggtggtgtggag
aacaattatgggaaaataaatatccttctgcaaacatatgttagccgaggagagatggat
agtttttccctaatttcagattctgcttatgttgcacagaatgctgcacgtattgttcga
gctctttttgaaatatcccttcgtaagcgatggccagcaatgacataccgactgctaaat
ctcagcaaggttatcgacaagcgactgtggggttgggtcagccctttgcggcagttcact
gtcctgcccccaccagtccttgccaagctggaacagaagaatcttaccattgataagttg
aaggacatgaggaaagatgaaattggtcatatgctccatcatgtaaatattggactaaag
gtcaaacagtgcgtccagcaaattccctctatctcagtggaagccaccatccagccgatt
actcgtactgttctgagagttaggttaaatatcacccctgatttcaagtggaatgatcag
gtgcatggaacaggtggagagccctggtggatttgggtggaagatcccaccaatgatcac
atttatcattcagaatattttattattcaaaaaaagcaggtcattgcaaaggaaactcaa
ctgttggtatttacaatcccaatttttgaaccgttgccctctcaatactacatccgggct
gtctctgaccgatggctgggagctgaggctgtgtgcattattaatttccagcatctgatt
ctgccagagagacatccacctcatacagagttactggacctccagcctttacccattaca
gctttaggacatcccaaatatgaaactctctacaaatttactcatttcaacccaattcag
actcagatattctatacattatatcacactgatagtaatgtactacttggagcccccact
ggttctggaaagacagttgcagcagaattagccatcttcagaattttcaataactatccc
actacaaaggcagtatatattgcaccccttaaggcattggtacgggaaagaattgaagac
tggaaaattaggattgaagaaaagcttggtaaaaaggttgtagagttgacaggggatgta
actcctgacatgagatccattgcccaagctgatcttattgttactacaccagagaaatgg
gatggaatcagccgaagctggcagaatagaagttatgtccaaaaggtttctgtcctcatc
atagatgagattcatctgctaggcgatgagagagggcctgtcctagaggttattgtgtct
cggactaatttcatctcgtctcacacagagaagcctgtcagagtagttggtctgtcaaca
gcactagccaatgccaaggatctagctgattggctaaatattaatcaaatggggctattt
aacttcaggccatccgtgcgtccagttccattggaagttcacatacaaggtttcccaggc
cagcattactgtcctcgcatggctagcatgaacaaaccagcctttcaggccattagaagt
cattctccagccaagccagttcttatctttgtatcatccagacgacaaactagacttaca
gctttggagctcattgcatttttggcaactgaagatgatccaaaacaatggctgaatatg
gatgaaagagagatgagtgccatcatttcaacagtacgagagtctaatcttaaactgacc
ctggcttttggaataggcatccaccatgctggccttcacgaacgggacagaaaaactgtg
gaagagctatttgtgaattgtaaaatccaagtatgtttattatatgcatga
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integrated database retrieval system
