Thamnophis sirtalis (common garter snake): 106552636
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Entry
106552636 CDS
T06107
Symbol
NSUN5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106552636 (NSUN5)
Enzymes [BR:
tsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
106552636 (NSUN5)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Other ribosome biogenesis factors
106552636 (NSUN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
ASPP2-like_RA
Motif
Other DBs
NCBI-GeneID:
106552636
NCBI-ProteinID:
XP_013926435
UniProt:
A0A6I9YS37
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MILPVTLSQLQGKVALTLSNTRLLYALVSETRRYSSVLDSIIDAAGLFRAEKKLQPHLAK
VLVYDLLIGKGLHGGGRGKALVLKHHARLQAELARLKVQKKVSRNEDLLPPAGDSDKALQ
MPRYVRVNLLKTCVDDVVDYFKRQGYSYQGKAARMEEAILSRKKFLLDLHLPDLLIFPPQ
SDLHENQLYQAGHIILQDKASCLPAFVLNPTPGSQVIDACAAPGNKTSQLAAIMKNKGRI
FAFDLDAKRLATMSTMLVRAGVACHELAHQDFLATDPTDSKYSKVRYILLDPSCSGSGMV
NRLAEEESTSLPNRLQALAGFQRKMLAHALQFPALQRLVYSTCSVHKEENEDVVQDVLEQ
EGSAFRLVEVLPSWTPRGLPVFPEAKCFLRASPEETLTNGFFVAVLERKHKAYAASSAVL
LSEADSKLETNPNPATRKRKKKKTQTAFPNK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcccagttacattatcgcagctgcaaggcaaggtggccttgactctctcaaat
acacggctgctctatgcactcgtttcagaaacacgtcgctattcttctgtactggattcc
atcatagatgctgctggtttgttccgcgctgaaaaaaagctgcagccacatctggccaag
gtgttggtatatgacttactcattggcaagggacttcatggtggaggacgtgggaaggcc
ctggtattgaagcatcatgcgcgtctccaggctgagcttgcccgcttgaaggtccagaaa
aaagtgagccgcaatgaagatcttctgccaccagctggagactctgacaaagcacttcag
atgccgcgctatgtccgagtgaatttattgaagacatgtgtggatgatgtcgttgattac
ttcaagcgccagggctactcttaccagggcaaagcagcccgtatggaggaagcgatctta
tccaggaagaaattcctgctggacctccatcttcctgacctgctgatcttccctcctcag
tcagaccttcatgaaaaccagctctatcaggctgggcatatcattctccaggacaaggcc
agctgcctcccagcctttgtcctgaaccccactccagggtcccaggtgattgatgcctgt
gctgctcctggcaacaaaaccagccagctggctgccatcatgaagaacaaagggcggatc
tttgcctttgatctggatgccaagcggctggccaccatgagcactatgttggtacgggca
ggggtcgcctgccatgagctggcacaccaagacttcttagcaacagatcccactgattcc
aagtacagcaaagtgagatacattctcttggatccttcatgcagtggctcaggtatggtc
aaccgcctggcagaggaggaaagcacctccctgcctaatcgactgcaggcacttgctggg
ttccagcgaaaaatgctggcacatgcattgcagttccctgcccttcaacggctggtttat
tccacgtgctcggtgcacaaagaagagaacgaagatgtggtgcaggatgtgttggagcag
gagggaagcgccttcaggttggtagaagtcctgccatcctggacccctcgtggcttacct
gtttttcctgaagccaagtgctttctccgagcgtcgccagaagaaacactgaccaatgga
ttctttgtagcagtgttggaaaggaagcacaaagcatatgcagcaagttctgcagtgctg
ctttcggaggctgacagtaaattagaaacaaatcccaatccagcaaccagaaaacgaaaa
aagaagaagacacaaacggcttttcccaataagtga
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integrated database retrieval system
