Thamnophis sirtalis (common garter snake): 106552765
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Entry
106552765 CDS
T06107
Symbol
LCOR
Name
(RefSeq) ligand-dependent corepressor isoform X1
KO
K26260
ligand-dependent corepressor
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106552765 (LCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106552765 (LCOR)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106552765 (LCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4553
Motif
Other DBs
NCBI-GeneID:
106552765
NCBI-ProteinID:
XP_013926595
UniProt:
A0A6I9YSI1
LinkDB
All DBs
Position
Unknown
AA seq
1667 aa
AA seq
DB search
MQRMIRQFAAEYTSKTSSTQDSSSPNSTKNQSLLKASPVASSTAGARAQNPVLSKLLMAD
QDSPLDLTVRKSQLDPSEQDGVLDLSTKKSPCAGNASLSHSPGCSATPGNGEETAEAVAI
DSLGQPKSPLEKIMVRLCTYHQKHFVRVLNDICSEVQTGYEGQQLSGPENMDVSTCSLGC
SQYHIENQEHGTSCSESKNPLLLGTEQSEARGSLQILCHKLKHAVELKSTDRRDNCSSIV
RRDFPELPTIRTTSISPRDSPTQGYLTASNTHHSIKNLEGQTSATEQEMGARKGEDDKDQ
VQSRGLLGGYVAAKATNVNINEENLENRVGSLKNPFKAFPEETRETAFTTSSPRRADKEN
ALQCSSKASMHQDTEINDQETRSKVENHYLASGKSKGVCHMHPGDKTHVENAKDIWLPIN
SMPAVHNKTTNGHSRVKNISASTKSTRKSKKSSGLRINDYDNQYDVVYISQPITECHYES
KKTVSARKTARKSTRGYYYNGECCELPTIRTLAKTPHSQENGNILATRPEVLTSPIQGIS
LPSDSYLAATDPVGSNDDQRSSTVAPTQEDSFNEIRAEQCSYESISSKVSVPKQREASLA
EEATVPVSLFPCPVFHSDKDNLFVSSLQTMTVSFPRENEGVLQDSTDVLEANSSGSDSYN
CNRSKENSDSIADSVVHSVSEAANDKTAIPEPPILVAPEPHASMDLLMPEVSANSVDLLP
PLDEPASVIDVSPSIEPPLLSPIDLAEPSVVPSTLDVLDPCMTFPTEIPYIPNSVSPVQL
VASPRSMSPVIDPTSGVPELPTDIDQEPPETLSAESSVVATIKMDVELPQLLPNLEAAKL
PLSLDCTNTDKTTTENSQNLEGLLVECKNVLPIVADNEDKGEKNINDTINISETTKSDEE
MEVNSKTPVEPKTSEKDKKETSSKTNIDKKRRREKKTHIVSDRCLRSQQSLVPTEDSSEQ
PCSSNSLQRPQLQIKLSKSPGAKRFKREVQLDGATSVCLPNDRHNQTLINESSKSTEQQP
DEGNDITISQTYKKLMAKESVNRGIEESQNGEDNKDKPAAMLEICLEANSDKRSVHVPTE
MSDKTEKQVDLKPKSLENSDGPINIIEVLSNQHETSSFICPGSKHAQPEKTMKCKKPALQ
FYNLRHTPTTAHVATATKNTSEKAIGQANSDIMTTSADPVVTDEPNARNENSLGFNSMKV
LSDKPRFVEWCAEEDNQELITNFSTQYMKIQKGWIQLEKETQPAPKVKNKSDKLKEIWKS
KKRTRKFKGSTEVQKLSPVQMLFMKGFDISNICKWFMETTETKSLVIVKKLNTRIPGDIP
LMKLPLQKGCSSGIYPSSVQAERLKKHLKKFAAMTPAKNTIKIPKLWNRPRENGDQTESE
QTVGPKQTSPSEVSLAQCIGPKSIPPSPSMPVQTTSRILRKYSNLRGKLHGFHRVVKQER
HDCVSKQHLAENTSSNKSMCIKPLMSPKLAQQVKDIQLPTKSTPIEKGGKGRKGKGKLQE
DTSGKGNPQQSKKKTPNENVRTLAMRQLSPSSKERISLKKASKVKQAGAPATRKQTAAGR
NNKHTSQNEKSKKLIDSRPGKKKAPAHIGKASTSQKASLLSKQQGLIKALKEKMVRNPPS
QPLKKASSEKALTRSVKRIQENKTRSKRKLRAKKESSPSKRRRLDAK
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggatgatccggcaatttgctgctgaatatacctcaaaaactagctctactcag
gactccagttcgcccaatagcacaaagaaccaaagcctgctgaaagcatctccggttgcc
tcatccactgcaggtgcaagagctcaaaatcccgtgctcagcaaacttctcatggctgac
caggactcacccttggacctcactgtcagaaagtcacagttggaccctagtgaacaagac
ggagtacttgatctgtccactaagaaaagtccatgtgcaggcaacgcctccttgagccat
tcacctggctgctctgctactcctgggaatggtgaggagacagcggaggcagtagcaata
gattctcttggccagccgaaatctccactggaaaaaattatggtcagactctgcacatac
caccagaaacactttgtccgtgtcctgaatgacatctgctctgaagtacaaacaggctat
gaaggccagcagttatctggacctgaaaacatggatgtgtctacttgtagtttaggatgc
agccaatatcatattgagaaccaggagcatggaacttcttgctctgagtcaaaaaaccct
ttattgctgggtacagaacaatcagaggctcgtggctctttgcaaatactatgccataag
ctgaaacatgctgtagaactgaaatctacagacagaagagacaattgcagttctattgtc
agaagagatttccctgagcttccaactattagaacaacttctataagtcccagagacagt
cccactcaagggtacctcactgcctccaatactcatcactctattaagaatctggaaggt
cagacctctgctactgagcaagagatgggggctagaaaaggtgaagatgacaaagatcag
gtgcaaagtagaggtttactgggaggctatgtagctgcgaaagcaacaaatgtgaacatt
aatgaggagaatttagagaatagggtaggttctttgaagaaccctttcaaagctttccca
gaggaaactcgagagacggctttcaccactagctctccacggagagcagacaaagagaat
gccttgcagtgcagctccaaagcctctatgcaccaggatacggaaatcaatgaccaagaa
acaagatcaaaggtagagaatcactatctggcttcagggaaaagcaagggagtctgccac
atgcatcctggtgacaagactcacgtagagaatgccaaagacatttggctgcctattaat
tccatgccagcagtgcacaacaaaaccaccaatgggcactcccgggttaagaacatttca
gcttctactaaaagtacacgtaaaagcaagaagtcttcaggattaagaataaatgactat
gataatcaatatgatgttgtctatattagccaaccaattacagaatgtcactatgagagc
aaaaagacagtatcagcaagaaagacagcaaggaagagcactcgtggatattactacaac
ggtgaatgttgtgagcttcctactattcgcaccttggccaagactccgcattcacaggag
aatgggaacatcctggcaacaaggcctgaggtgctaacaagtccaatccagggcatttct
cttccaagtgacagctatttggctgcaactgaccctgtgggtagcaatgatgatcaaaga
tcttccacagtggcccctactcaagaagattccttcaatgaaataagagctgagcaatgc
tcttatgaaagcatctcttctaaggtcagtgtcccgaagcagagggaagctagtcttgct
gaagaagctaccgtgcctgtttctctatttccttgccctgtttttcattcagataaagac
aacttgtttgtgtcttcactccagaccatgactgtctcttttcctcgagagaatgaaggg
gtcttgcaagacagtactgatgtactggaggcaaatagctctggctctgattcttataac
tgtaatagatctaaagaaaatagtgacagtatagcagactctgttgtacattctgtctca
gaagctgctaatgataaaacggctatcccagaacctcctatcttggtagcgccagaaccc
catgctagcatggatctgctgatgcctgaagtatcagccaatagtgtggacttgttgcct
ccactagatgagcctgcttctgtaatagatgtatcaccatctatagaacccccactactt
tcccctatagacttggccgaaccctcagtagtaccatccactcttgatgttctggaccct
tgtatgacctttcctacagagattccctatattcccaacagtgtctcacctgtgcagctt
gttgccagcccaaggagcatgtctcctgtaattgatcctaccagtggggttcctgaactt
cctactgatattgaccaagaacctccagagactctttctgcagaatcttcagtagtagca
actatcaaaatggatgtggagcttccccagctgcttcccaatttagaagcagcaaagctg
cctctcagtttggattgtactaacacagacaaaaccactactgaaaattcccagaatttg
gaaggactgcttgttgaatgtaaaaatgtgctgcccattgtggctgacaatgaagataag
ggagagaaaaatataaatgacacaataaacatcagtgagaccaccaagtctgatgaggaa
atggaggttaatagtaaaactccagtagagcccaaaacatcagaaaaggacaagaaagag
acttcttccaaaacaaacatagacaaaaaacgaaggcgagagaaaaaaacccacattgtt
tcggatcgctgtcttcgaagccagcagtccctggtgcctacagaagacagttctgaacaa
ccctgttcttccaattctcttcagcgtcctcagctacagataaagctttctaaaagtcct
ggtgctaagcgttttaagagagaggtacaacttgatggggcaacatctgtgtgccttcct
aacgacagacacaatcaaacactgataaatgagagtagcaaatctactgaacagcagcca
gatgagggaaatgacatcacaataagccagacctataagaaactgatggcaaaggaatca
gttaatagaggaatagaggaaagccagaatggagaagataacaaagataagccagcggca
atgcttgaaatttgcttagaagccaattctgacaagagaagtgttcatgttccaacagag
atgtctgataaaactgaaaaacaagtagatttaaagccaaaaagtttagagaattctgac
ggtcctataaatattattgaagtattgtccaaccagcatgaaacaagtagtttcatatgt
cctggtagcaagcatgcacagccagagaagacaatgaaatgcaagaaaccagccctacag
ttctataatttgaggcatacccctactacagctcatgtggccactgccacgaaaaataca
tcagaaaaagcaattggacaagcaaactctgacatcatgaccacatcagcagatcctgtt
gtcacagatgaaccaaatgcaagaaatgaaaactctcttggttttaacagcatgaaagta
ctttctgacaagcccagatttgtggaatggtgtgctgaggaagacaaccaagaactcatc
actaactttagcactcagtatatgaagatccagaaaggctggattcagctggagaaggag
actcagcctgctccaaaggtcaagaataaatctgacaagttgaaagagatttggaaaagc
aagaagaggactcgaaaatttaaaggatccactgaagtccagaaactgtcccctgttcag
atgcttttcatgaagggttttgatatttccaatatctgcaaatggtttatggagacaact
gaaaccaaatctctggtcattgtgaagaagctgaacacacgtatcccaggagacattcct
ctcatgaagcttccactccagaaaggttgttcttctggcatctatcccagttctgtccaa
gcagagcgtctaaagaaacacttgaagaagtttgctgctatgaccccagcaaaaaatact
ataaagatcccaaagctgtggaacagacctcgagagaatggtgaccagactgagtcagag
cagactgttggtccaaagcagacatctccctctgaagtcagcttggctcaatgtattgga
cccaagagtatcccgccttcccctagcatgccagtgcagacaacctcacggatcctgagg
aaatattccaacttgagaggcaaacttcatggattccatagggtggtgaaacaggagagg
catgactgtgtgtccaagcagcacttggccgaaaacacttcaagcaacaagagcatgtgc
attaaacccttgatgtcccccaagttggcccagcaagtgaaagacatccaacttcctact
aaatctactccgattgaaaaaggaggaaaggggaggaaagggaaaggaaagttacaggag
gacacctccggtaaaggcaaccctcagcaaagcaaaaaaaagacaccgaatgagaatgtc
aggacactggccatgcggcagttgagtccttcaagcaaggaaagaatctctctcaagaaa
gccagtaaagtgaagcaagcgggagctccagctactagaaagcagacagcagcgggaaga
aataataagcacacctctcagaatgagaagtcaaagaaacttattgactcgcgacctggg
aaaaaaaaggctcccgcccatatagggaaagctagtaccagtcaaaaggctagcctgctt
tctaagcagcaagggcttataaaggctctgaaggagaaaatggtgcgaaatccccccagt
cagcctcttaaaaaggcaagcagtgagaaagctctcaccagatcggtgaaacgaattcag
gagaacaaaacccggagcaagaggaagctgagggcaaagaaagaatcttctcccagcaag
cgcaggcggctggacgcaaagtag
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