Thamnophis sirtalis (common garter snake): 106552840
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Entry
106552840 CDS
T06107
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106552840 (RNF40)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106552840 (RNF40)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
106552840 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
KASH_CCD
zf-RING_2
zf-rbx1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
106552840
NCBI-ProteinID:
XP_013926693
UniProt:
A0A6I9YRY2
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MSGAGSKRAAGDGGAGPPEKKSNREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKIA
ERLEQRQVFEDELRERIEKLEKRQATDDATLSIVNRYWKQLDETVQVLLRRYDGDCGQAP
EEPKLEIPGSELEAVHLESSERREAVLSPVTPPVPWKAGDLVLSEPSLSFLATLASSSNE
EIELQLQERMEFSKAAVSRIVEASDKIHRRTEELCQKIHARVEFDQLEEVVKALNKELTR
ENRHLQDLITQMQEKHHKISLEYTELQDKVTSSETKVLEMETTIEDLQWDIEKLRKREQK
INKHLTEALEQLNSGYYASGSSGGFHGGQITLSMQKFEMLNAELEENQELANSRMAELEK
LQQEMQQAVRTNEKLKVALRSLPEEAVKETLEYKVLQSQFSLLYNESLQVKTQLDEARAL
LLTTKNSHLRHIEHMESDELNVQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQ
AGPINREMRHLISSLQNHNHQLKGDVQRYKRKLREVQAEINKVRMQQCGFPSSLVIAAPA
PGNEDSGHPGVAPVKEEEETASSEVKKEFKEVQVKKEPKEEVVSPQLLGSTEGVKKEEEE
TSAPQPPAPHPPPPPRAKESERSKGRGGDRGVDRERSRDRDKEVSSSSSSSSSSSRDREK
QKGGGGSEDAKKKDSDLLKQLRTELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAEK
KTKAEVEELRVRIRELEEKEKKESKKMADEDALRKIKMAEEQIEHLQKKLAATKQEEEAL
LSEMDVTGQAFEDMQEQNMRLNQQLREKDDANFKLMSERIKSNQIHKLLREEKEELAEQV
LALKSQVDTQLLVVQKLEEKERVLQGNMGTVEKELTLRSQALELNKRKAVEAAQLAEDLK
VQLEHVQAKLKEIQTFMAENRAAKEKESFNLKRAQEDISRLRRKLEKQRKVEVYADADEI
LQEEIKEYKAKLTCPCCNTRKKDAVLTKCFHVFCFDCVKTRYDTRQRKCPKCNAAFGAND
FHRIYIS
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagctggaagcaagcgggctgctggagatggaggagcagggcctcctgagaaa
aaatccaaccgggaggagaagaccaccactacgctcattgagcctatccgccttggaggc
atctcttccacggaggagatggacctcaaggtgcttcagttcaagaataagaagatagca
gagcggctggagcagcggcaagtgtttgaggatgagctgcgtgaacgcatagagaagctg
gagaagaggcaggccactgatgatgccactctctcgattgttaaccgctactggaagcag
ctagatgagacggtgcaagtgctcctcagacgttatgatggagattgtgggcaggcccct
gaggaacccaaattggaaatcccaggctcagaactggaagctgttcacttagagagctct
gaaaggagagaggcagtgctgtcccctgttacgccccctgtcccctggaaggctggggac
cttgtgctgagtgagccatccctttccttcttggctaccttggccagcagcagcaatgaa
gaaattgagcttcaacttcaggaacgcatggaattttccaaagctgccgtctcccgcatt
gtggaggcttcggataagatccaccggcgcacagaagagctttgccagaagatccatgca
cgggtggagtttgaccaattggaagaagttgtgaaggccctcaacaaggagctgaccaga
gagaatcgccaccttcaggacctgatcacacagatgcaggagaaacaccataaaatttcc
ttggagtacacagaactgcaggacaaagtgacttcatcagaaactaaagtgctggaaatg
gaaacaaccattgaagacctgcagtgggacatagagaagctgcgcaaacgggaacagaag
atcaacaagcacctgactgaagcgttggagcagctcaattcaggttactacgcctcaggc
agttctggtgggttccacggtggccagatcacacttagcatgcagaagtttgagatgctg
aatgcagagctggaagagaatcaagaacttgccaacagtcgcatggcagagctggagaaa
ctgcagcaggaaatgcagcaggctgttagaactaatgagaagctgaaggtagcactacgg
agtcttccagaagaggctgtaaaggagactctggagtacaaagtgttgcaatcccagttc
tcactgctgtacaatgaaagcctgcaagtgaaaacacagctggatgaggcccgggccctg
cttctcaccaccaagaacagccacctgcgccacatcgagcacatggagagtgacgagctg
aatgtgcagaagaaactgcggacggaggtgatccagctggaagacacgctggctcaggtg
cgcaaggaatacgagatgctgcgcattgaatttgagcagaacctggcagccaacgagcaa
gcaggtcccatcaatcgggagatgcgccacctcatcagcagcctccagaatcacaaccac
cagctgaagggagatgtgcagcggtacaagcgcaaattgcgggaggtgcaggccgagatc
aacaaggtccgcatgcaacagtgtgggtttccttctagtttggtcattgcagccccagcc
ccagggaacgaagactccggccaccctggggtagctcctgttaaagaggaggaagaaacg
gcatcctccgaagtaaagaaagaattcaaggaggtgcaagtaaagaaagagcccaaggaa
gaggtggtgtctcctcagctgctcgggagcacggagggagtgaaaaaggaagaagaggag
acctctgccccccagcctcctgctccccatccgccaccaccaccccgcgccaaagagtct
gagcggtccaagggacgtggtggagaccggggcgttgaccgcgagagatcccgggatcgt
gacaaagaggtctcttcctcctcctcctcctcctcttcctcttcacgggatcgggagaag
cagaagggtggtggaggtagcgaagatgctaagaagaaagattcagatttgctgaagcag
ctgcgaactgagctcaaaaaggctcaggagagccagaaggagatgaagcttctcttggac
atgtacaagtcggcccccaaggagcagcgggacaaagtgcagctgatggcagctgagaag
aagaccaaagccgaggtggaagagctgcgggtgaggatccgtgaactggaggagaaagag
aagaaagagagtaagaaaatggccgatgaggatgccttacgcaagatcaagatggccgag
gaacaaattgagcatctccagaaaaaactggcagcgaccaagcaggaggaagaggctctt
ctctcagagatggacgtgacaggccaagcgtttgaggacatgcaagagcagaatatgcgg
ctaaaccagcagctgcgtgagaaggatgatgccaacttcaagctgatgtcggagcgcatc
aaatccaaccagattcacaagctcctgcgggaggagaaggaagaacttgccgagcaggtg
ctagccctcaagtctcaggtggacacccagctcttagtcgtgcagaagctggaggagaag
gaacgggtcctgcagggcaatatgggcaccgtggagaaagagctcacgttacgcagccag
gccctggagctcaacaagaggaaggcggtggaggcagcccagctggcagaagacctgaag
gtgcagctggagcatgtgcaggctaaactgaaggagatccagaccttcatggcggagaac
agggcagccaaggagaaggagtctttcaacctcaagagagctcaggaggacatatctcgc
cttcggcgcaaactggaaaaacagcgcaaagtggaggtgtatgcagatgccgatgagatc
ctacaggaggagatcaaggagtacaaggccaagctcacctgtccgtgctgcaacacgcgc
aagaaggacgccgtcctcaccaaatgcttccacgtcttctgcttcgactgcgtcaagacc
cgctacgacacccgccagcggaaatgccccaagtgcaatgccgcctttggtgccaatgac
ttccatcgaatctacatcagctga
DBGET
integrated database retrieval system
