Thamnophis sirtalis (common garter snake): 106552874
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Entry
106552874 CDS
T06107
Name
(RefSeq) low-density lipoprotein receptor-related protein 3-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106552874
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
106552874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
106552874
NCBI-ProteinID:
XP_013926744
UniProt:
A0A6I9YS33
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MYVCLDFGSAHCMNIDSQEGKVGQASCQSDEFRCLNGKCIPITWKCNSMDECGDNSDEKN
CSLPPTEPQSNICPSGTFQCNIPHSTKCLLNELKCNAVKDCSDGSDEENCPDLSCGKKLS
NFYGSFASPDFFRLDRNRADLCCTWKVDTQDNRHVLLQLSLQLGYKDYVKVYDGLEEKAD
KLMETLSYRNNKHSVSLESAKGQMTILYYAWSKSTGHGFNATYQVKGYCLPWEHPCGDEE
ECYSDKQHCDGWWHCANGKDEENCPACQKNEYPCEGNSGLCYSLLDRCNNQKNCPNGSDE
KNCFVCQPGNFHCGTNLCIFETWRCDGQEDCQDGSDEHNCLVIVPRKVITAALIGSLVCG
LLLVIALGCAFKLYSLRSREYRAFETQMTRLEAEFVRREAPPSYGQLIAQGLIPPVEDFP
VYNASQASVLQNIRTAMRRQMRRHSSRRGSSRQRLGRLWNRFFHRPRARGQVPLLHTTRT
SQTVLGDGILNCTDGAPAESLPASPEEGCGPPGGVSEPGNSSSALEAEATEVPSTESVPS
PCPAALPDAEGQHSCMAEDAPEGRLAQAAKADSGRTFRDPLLERVTEIHQWGRVSHGRTA
GDGRHSQLLREELRHSVPLKNWESGYPESHGALPLRGERQPNGDPHSCHEEPFGIHPPRC
HSMEVPIAASPLRAPERTPSDDESLLVC
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgtgtcttgatttcggctcagcacattgcatgaacatagatagccaggaaggg
aaggttggccaagccagctgccaatcggacgaattccgctgcctcaatggcaaatgcatc
cccatcacttggaagtgcaattccatggacgaatgtggggacaactccgacgagaaaaac
tgcagcctccccccgacggagccccagtccaacatctgcccttcggggaccttccagtgc
aacattccccattccaccaagtgcttgttgaacgagctgaaatgcaacgccgtgaaagac
tgcagcgacggctccgatgaggaaaattgccccgatctctcctgcggcaagaaactcagc
aatttctacggctcgttcgcctcgccggatttcttccgcctggaccggaatcgagccgac
ctctgttgcacgtggaaggtggacacgcaagataaccgccacgtcctcctgcagctcagt
ttgcagctgggctacaaggattacgtgaaggtgtacgacggcttagaggagaaagccgac
aagctgatggagacgctctcgtatcggaacaataagcactcggtcagcctggagtccgcc
aaggggcagatgaccatcttgtactacgcctggtcgaaaagcaccgggcacgggttcaac
gcgacctatcaagtcaaagggtattgccttccgtgggagcacccgtgcggggacgaggag
gagtgttactccgataagcagcactgtgatgggtggtggcattgcgccaacgggaaggac
gaggagaattgtcccgcctgccagaagaacgagtacccctgcgaggggaatagcgggctg
tgctactccttgctcgaccgttgtaacaaccagaagaactgccccaacgggtcggacgag
aagaactgttttgtgtgccagccggggaacttccattgcggcaccaacctctgcattttt
gagacctggcgttgtgacggccaggaggattgccaagatggcagcgatgagcacaactgt
ttggtgatcgtgccccggaaggtcatcacggctgcgctcatcgggagcctggtctgtggg
ctgctgctggtgattgccttgggttgtgccttcaagctgtactccctgaggagcagggaa
taccgggcatttgaaacccagatgactcgcttggaggcggagttcgtaaggcgtgaagct
cctccttcttacgggcaactgatcgcacaaggcctcattccacccgtggaagacttccct
gtttataatgcatcccaggcttccgtgctgcagaacatccgaacggccatgaggcggcaa
atgaggcgccattcctcgaggcgcggctcttccaggcaacgtttgggtagactctggaac
agattctttcacaggccgcgagcgagaggccaggttcccctcttgcacaccacccgcacc
tcccagacggtcctgggggacgggatcctgaactgcacagatggggcacctgcagagagc
ctcccggcctctcccgaagagggttgcggcccacccggaggggtttccgaacctggcaac
agctcctcagccttggaggcagaagcaacggaagtcccgtccaccgagagtgtgcctagt
ccttgcccagctgctctgccagatgctgagggccagcacagctgtatggccgaagatgcc
cctgagggcagactagcacaagctgctaaagcagattcaggaaggacatttagggaccct
ctgctggaaagagtgacagaaattcaccaatggggacgggtgtcacatggcaggacagct
ggagacggcagacattctcagctgctgagggaagagctgcgtcattcagtgcccttaaaa
aactgggagtccgggtacccggaaagccacggagccctccctcttcggggggaacgccag
cccaatggcgacccacactcctgtcatgaagaaccttttggcattcaccctcctcgttgc
cattccatggaagtgccaatagccgcctccccgctccgcgcccctgaaaggacccccagt
gatgacgagtctttgttggtgtgctga
DBGET
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