Thamnophis sirtalis (common garter snake): 106552904
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Entry
106552904 CDS
T06107
Symbol
PUF60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106552904 (PUF60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsr03041
]
106552904 (PUF60)
Spliceosome [BR:
tsr03041
]
Complex A
U2 snRNP components
U2 related factors
106552904 (PUF60)
Complex B
106552904 (PUF60)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
106552904
NCBI-ProteinID:
XP_013926779
UniProt:
A0A6I9YS68
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MAAAAATTTTTTTAALSLGTETIKVENGQSTSAKLGLPPLTPEQQEALQKAKKYAMEQSI
KSVLVKQTIAHQQQQLTNLQMAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIK
SIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIID
QLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEK
AQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQ
EAVAGVAGAAVLSTLATPGLVTPALTLAQPLGALPQAVMAAQAPGVITGVTPARPPIPVT
IPQVGVVNPILASPPTLGLLEAKKEKEEEEVFQESERPEMLSEQEHMSISGSSARHMVMQ
KLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIV
KIFVEFSMASETHKAIQALNGRWFAGRKVVAEVYDQERFDNSDLSA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgcggcgaccaccaccaccaccaccaccgcggcgctctctctgggcacc
gagaccatcaaggtggaaaatggacagagcacgtcagccaagcttgggctccctcctctt
accccggagcagcaggaggcccttcagaaggccaaaaaatacgcaatggagcagagcatc
aaaagcgtcctggttaagcagacgattgcccaccagcagcagcagctcaccaacctccag
atggcagcgcagcggcagcgggccctggccatcatgtgccgcgtctacgtgggctccatt
tactatgagctgggagaggacaccattcggcaggccttcgccccctttgggcccatcaag
agcatcgacatgtcctgggactccgtgaccatgaagcacaagggctttgcctttgtggaa
tatgaggtcccggaagctgctcagctggccctggagcagatgaactccgtgatgcttgga
gggcggaacatcaaggtggggaggcccagcaacattggccaagcgcagcccatcatcgat
cagctggcagaggaggctcgagctttcaaccgcatttacgtggcatcggtgcaccaggac
ctttccgacgacgacatcaagagtgtctttgaggcctttgggaagatcaagtcctgcacg
ctggcccgggatcccaccacggggaagcacaagggctacggcttcatcgagtacgagaag
gcccagtcctcccaggacgccgtctcttccatgaacctctttgacttggggggccagtac
ctccgcgtgggcaaagcagtcaccccgcccatgcccctgctgactccagccaccccggga
ggcctgccccctgcagcagctgtagccgcggctgccgccacggcgaaaatcaccgctcag
gaagccgtggcaggcgtggcgggtgctgccgtccttagcacattggccactcccggactg
gtgaccccagccctgaccctcgcgcagcccctgggggccttaccgcaggctgtgatggca
gctcaagctcctggcgtcatcacgggggtcactccggctcgcccacctattcccgtcact
attccccaggtgggtgtggtgaaccccatcttggccagtcccccaacattaggcctgcta
gaagccaagaaggagaaggaggaggaggaggttttccaagaatctgaaaggccagagatg
ctgagtgaacaggagcacatgagcatctctggcagcagcgcccgccacatggtgatgcag
aagcttctccggaaacaagagtcaacagtgatggttttgcggaacatggtggatcccaag
gacattgatgatgatttggaaggagaagtaacagaagagtgtggcaaatttggggctgtc
aacagagtcatcatctatcaagagaagcagggcgaggaagaagacgcggagatcattgtc
aagatctttgtggaattctccatggcctcagagactcacaaagccatccaggctctgaat
gggcgctggtttgcgggcaggaaggttgtggccgaagtgtatgaccaggagagatttgat
aatagtgacctctccgcatga
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