Thamnophis sirtalis (common garter snake): 106552936
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Entry
106552936 CDS
T06107
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106552936 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
tsr04091
]
106552936 (FREM1)
Lectins [BR:
tsr04091
]
C-Type lectins
Lecticans
106552936 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
106552936
NCBI-ProteinID:
XP_013926820
UniProt:
A0A6I9YT52
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MNEPISQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDFVILRLYRFTETETFTETVTL
LVKILEPDCNIVKMSSSALEVPEFHGLSNIINKNIITLDYNRKINLECTISLNSLETFLP
AHGQLVIGKNKEEVPRGDQPQSSFHTTNLKTVQNIRVNCDEFLLMGLRYQHLDPPSPNID
YIPIRLDLTDTRSKILYKSEYAWIPVQIKNAVSNQPPQPAFMAMLILEADQFILSPLSTA
ILDAEDSETSKSLLVFNITQPPQEGYITHLQDHTKSISSFTWTSLDNMLIAYQPPNSSHT
ERRNYEVEFEVYDLYFERSVPMTLYISVRTADTNAPRVSWNMGLDLLEGQSRPITWEQLQ
IVDNDDISGVRLVPVDGLQHGQLTVRGGKGFMFNVLDLKTGVVRYHHDDSDSTKDSIVFR
IFDGHHSSRHRFPINILPKDDSPPFLISNVEIEVHEGETILIQSSMLQASDMDSSDDYIL
FNITRLPQAGEIMKKPKTDFIGYPVTKFLQKDLLNGIIYYHHLGGEIFEDSIELILCDSH
DPPNLSEIQIIRVHIIPVNDQLPKEFPGASRHLIVKETEIAYLTKTHLHYIDMETQDSEL
IYIITSPPFFSFAHYHTDAGKLFMVESIPRLIKDPSIPPLRSFTQHAINHMKVAYVPPME
DIGPEPQHIQFAFSISNQHGGTLYGNCFNITVLPVDNQSPEVLTNNLKVEEGGQSTITKG
HILISDVDTKLENIRIHLLKLPLHGTIELNENPMNQRDWLTCEDLQMSKVRYHHNGSEFP
QDHILFEATDGVNSFEFILHVKVISVNDEPPVMNADLIPFMQCPEGQAVSITSEHLYATD
KDSEDMQLLFMLARPSKYGVVKRGGLVIDRFLQADVVSGTVTYEHTSGEIGLALIFDVLT
FIVLDDEIDPDVKACCDEKASFFPVPYHKSFPVYDINITIFPVDNQPPSIATGLVFAVQE
GASATITSKHLYATDLDTNADDLQFVLTSPPQFGYIENILPSPGFEKSNAGISIGRSVLQ
GGPLVFKCRKVCIFFGVSYSILVHAYSCLLGLLSIMFLLVDFTEFYGETRIAL
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagccaatctcccaaagagttgggaagctgactccacaggtgtttgactgccat
tttcttccgaatgaagtcaagtacactcacaacggatgcccaattcttgatgaagacttt
gtcatactaaggctttataggtttacagaaactgaaactttcaccgaaacagtcactctt
cttgtaaagatacttgaaccagattgtaatattgtcaagatgagttccagtgctttggaa
gtccctgaatttcatggcctgtctaacataattaataagaacataatcactttggactac
aacaggaagataaacttggaatgcactataagcttgaactctttagagacgtttctgcca
gcccacgggcaacttgttattggaaaaaacaaagaagaagtacctagaggagatcagcca
cagagttccttccatacaaccaacctgaagactgttcagaatatcagagtgaactgtgat
gagtttcttttgatgggacttagataccaacatttggaccctccttcacctaatattgat
tacattcccatcaggctagatctcactgataccagaagcaagattttgtataagtctgag
tatgcttggattcctgttcagatcaaaaatgcagtttctaaccagcccccccaacctgcc
ttcatggccatgctcatcttagaagcagatcaattcatcctgagtcccctatccacagcc
atattggatgctgaagacagtgaaacatccaaatctttgctagtctttaatatcacccag
ccaccccaggaaggttacattacacacctacaagaccacacgaaatctatctcatccttc
acttggaccagcctggataacatgctgattgcatatcaacctccaaatagcagccataca
gagagaagaaactatgaggtggaatttgaagtttatgatttgtactttgaaagaagtgtg
ccaatgactctttatatctctgtgagaacagcagacacaaatgcaccgagggtttcatgg
aatatgggtcttgatctcctggaaggtcagtctcgccccataacatgggagcagcttcag
attgtagacaacgatgatatcagtggagttcgcttggtccctgtggatgggttacaacat
gggcagcttactgtaagaggagggaaaggattcatgttcaatgtcttggatcttaagact
ggagttgttcgttaccatcatgatgacagtgattccactaaagactccattgtctttagg
atctttgatggccaccacagtagccgccacaggtttccaatcaatattctgcccaaagat
gacagccctccgtttctcattagtaatgttgaaatagaggtccatgaaggagaaacgatc
ctgatccaaagttcaatgcttcaagcatcagatatggactctagcgatgactacatactc
ttcaatatcaccagattaccgcaagcaggagaaataatgaaaaaacccaaaacagatttt
attggttatccagttaccaaattccttcaaaaagacctgttaaatgggatcatttactac
catcacttaggaggagaaatatttgaagattcaattgaattgattctgtgtgatagtcat
gatcctcccaatctttcagaaattcagataattagagtacacataattcctgtgaatgat
cagctgccaaaagaatttccaggagcaagccgtcatctgattgtcaaggaaacggagatt
gcttatttaacaaagacacaccttcattacatagatatggaaacccaggacagtgagctg
atatacatcataacatctcccccattcttctcctttgcacattaccatacagatgctgga
aaattattcatggtagagagtattcctaggcttatcaaggatccttctattccaccacta
agatcattcactcagcatgccataaaccacatgaaagttgcctatgtgccgcccatggaa
gatattggtcctgaacctcaacacatccagttcgcattttccatcagcaatcaacatggg
ggaactttgtatggcaactgttttaacattactgtccttccagtggacaatcagtctcca
gaggtgcttacaaacaacttgaaagtggaagaagggggccagagcaccattaccaaaggc
catattttgatttcagatgtggacaccaagctggaaaacatacgtatacatctccttaag
ctccctcttcatggaactattgagttaaatgagaatcctatgaaccaaagagattggctg
acgtgtgaagatttacagatgtccaaagtcaggtaccatcataatggttcagagtttcca
caggatcatattctttttgaggctacagatggcgttaattccttcgaattcatcctccat
gtgaaggtaatttctgtaaatgatgaacccccggtgatgaatgctgacctcattcccttc
atgcagtgtccagaaggacaggcggtgtccatcacttcagagcacctctatgcaactgat
aaagatagtgaagacatgcagcttttgttcatgcttgcgcgaccttctaagtatggggtt
gtgaagagaggcggacttgtgatagatcgctttctccaagctgatgttgtttctggaact
gtgacatatgaacatacaagtggcgagattggcctagctcttatctttgatgttcttacc
tttattgtgttggatgatgaaattgatcctgatgtaaaggcctgttgcgacgagaaagct
tcattttttcctgtaccatatcataaatcctttccagtatatgatattaatattacaata
tttccagttgacaaccagccaccatccattgccactggacttgtgtttgctgtgcaggaa
ggtgcctcagcaactatcacaagtaaacacttgtacgccactgatcttgacaccaatgca
gatgacttacagtttgttttaacatcccctccccagtttgggtacatagaaaatatatta
ccatctcctggttttgagaaaagtaacgcagggataagtataggtaggtctgtgttacag
ggagggccgcttgtctttaaatgcaggaaagtttgtatcttctttggggtgtcttacagc
attcttgtacatgcttatagttgtctgttgggcttgttatctatcatgttcttgttagta
gatttcactgaattctatggagagactagaattgccttgtga
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integrated database retrieval system
