KEGG   Thamnophis sirtalis (common garter snake): 106553030
Entry
106553030         CDS       T06107                                 
Name
(RefSeq) DNA polymerase theta-like
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsr03400]
    106553030
Enzymes [BR:tsr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     106553030
DNA repair and recombination proteins [BR:tsr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    106553030
SSDB
Motif
Pfam: POLQ_helical DNA_pol_A HTH_61 DUF7898 Helicase_dom4_arc HHH_5
Other DBs
NCBI-GeneID: 106553030
NCBI-ProteinID: XP_013926923
UniProt: A0A6I9YQW2
LinkDB
Position
Unknown
AA seq 1683 aa
MAGRAGRKGVDTIGESILVCKPSEKSKGITLLHGSMKPLCSCLLSLNGEGVTSSMLRAIL
EIIVSGIASSSEDIQSYSSCTLLAASLRDFQDCRKDQEKICDGSIESCVKWLLEKEFIMI
SVSDVGKEIYRPTHLGSATLFSSFSPKAALEIFADLQRAMKSFVLENDLHSLYLVTPVYE
DWTKIDWYQFFCLWEKLPASLRRVAQLVGIEESFLACSVKGNIIAKTEKQYRQMAIHKRF
FTSLALLDLINEVPLKDVAKKYSCSRGQLQSLQQSAATYAGMITIFCNRLGWHNMEQLLS
QFQSRLNFGIQRELCDLVRISLLNAQCARALYNAGFITVADVAKGTLEEVENVFRNAAPF
RSTRRAVDEDEQAAKERLNTHFMWMSGMKGLTEGEAAHLIVEEAKRLLKHDLAVWGVQWN
PNSSILLDTSYTFSTKGSVTEGQRKWKNNHNMTLSEASVNSQIKNISSVKQKNKRQLDGN
SAEEIDNKAPIEEIEAEARNDIYSSAKKRMNLNRDMIKEAVENAEDILKRSLKEGIKKDV
ATGSKSNIELHFKQIMDKNTITNPNGILQVVNIDEVNTHTCSFSSKIECMKNGYSPVLDP
VFKEFEESFQLDTQTDRLLQQPMADETVNKQQLKDKKLVASLTQKNCIGIKGTNMSEKNS
ICVKDKLECGKGHSALLLGKVSDVGWPQTEKYPGTSVCLEPDSQLDSFLRHYQTPNLTEQ
QLTVLPNNISFSLSQFPSGVDINEANLNGSDSLLFDGDFNHIDGSQSGDNNERLMETIPQ
ELAIPSLFKSALKYDASDELKTRLNKPISNDTMNQKLSNGCNYIASDTSSLHEAKILNSI
VLPPFHKNSKTKNPDKTIKRLKSSEKNVSEIPQKDCAQENDNQMNKSGVLFDLSPGMQKV
LDRGLSPSYDKFEMGPNNEMNLKFSKNTKDSRTLALFPGQSELSLHKDFGRICLTKSKAN
QKNKNGKRVSWIDGNKMPPSPLNVMESTPQCIEIPVVTKAKNTISTDKVPYVRFLQKDKS
DLHTEEQVLQHQPENSEHVELNLEDNSVISEDFSLHLSQEKNPPASCSADNFSIIDVAND
KTLFQTFIEEWKTHTKFSISVACEKTKIPLSSHRSAIGAKFKQGGTSHKSLCENDGFPVH
ACEDLLVVGLAVCWGRKDAYYISLQQNSQSQIEVSPSLAQPPLDQDLPVAERLQHLKQRL
QESERAFSLVVYNFIQHYKILLKACGISLAGCFEDPKVACWLMDPESKEDSFHNMVANFL
LQDLFLLDKIGAGQGNQSLGLSASTDQSGRYRASVESVLVFHIMEKLHIILQKDNLQDIF
HKVEMPNQYCLALLELNGMGFSTVECEAQKHVMEAKLNEIENRIYQLAGHSFSLTCPDDV
AEVLFLEQKLPSDGELKMQRGKKVLGCTRKATTNKNRARLSKQFSTTKEVLEKLKKLHPL
PGLILEWRRITNAITKVIFPLQREKLFNPVLGMERIYPVSQFQSATGRISFREPNIQNVP
KDFEIEMPTMVEESPPFQKHPLLRSRCGKHSVLPCGPKSLTEEISNRKKILFSVSMRHAF
VPFPGGLILAADYSQLELRILAHFCSDNRLLRAFGNNVDVFRSIAAEWKKINPEEVGNDL
RQQAKQICYGIIYGIGAKSLGEQMGVQETDALCFIESFKSRYPGIQKFLKETVKKCTQDG
FVQ
NT seq 5049 nt   +upstreamnt  +downstreamnt
atggctggaagagctggaaggaaaggagtagatactataggtgagagtattttggtatgt
aagccctctgaaaaatcaaaaggaattactcttctccatggtagtatgaagccactatgt
agctgtttgcttagcctcaatggagaaggagtcacctccagtatgttacgggcaattctt
gagatcatagtaagtggaatagctagctcttcagaagacatccagagttattcatcctgt
acactccttgcagctagtttgagagacttccaggactgtaggaaagaccaggagaaaatt
tgtgatggatctattgagagttgtgtaaagtggctgcttgagaaagaattcatcatgatt
tcagtatcggatgttggcaaagaaatatatcgtccaacacatcttggctctgctacactg
ttttcctccttttccccaaaagcagcgctagaaatttttgctgatctccagagagcaatg
aagagttttgttctagagaatgatctgcatagtctttatttggtcacacctgtttatgaa
gattggaccaaaatcgattggtaccaattcttttgcttgtgggagaagttgcctgcctca
ttgagaagagtagcacaacttgtggggattgaagaaagttttttagcctgttccgtcaaa
ggcaacatcattgctaaaacagagaaacaatataggcaaatggctatccacaaaagattt
tttacaagcttggctcttctggatttaataaatgaagtccctttaaaggatgttgctaag
aaatatagctgcagtcgtggacagcttcagtctttgcaacagtctgccgctacatatgca
gggatgattactattttctgcaaccggttgggatggcacaacatggaacaattgctgtct
cagtttcagagtcgccttaactttggaattcagagagaactctgtgatcttgtccggata
tctttgctaaatgcacagtgtgctagagctctttataatgctggttttatcaccgtggct
gatgtagctaaagggactcttgaggaggtggaaaatgttttcagaaatgcagcaccattc
agaagcactcgcagagccgtagatgaagatgagcaagctgccaaggagcgtcttaatacc
cattttatgtggatgtctggaatgaagggcttaactgaaggtgaagcagcccatctgatt
gtagaggaggctaaaagacttttaaagcatgacttagctgtttggggagtgcaatggaac
cccaattcctcaattttattggatacgtcttatacattttccacaaagggaagtgttaca
gaaggccaacggaaatggaaaaataaccacaacatgactttatcagaagcaagtgtcaat
tcacaaattaaaaatatatcatctgttaaacaaaaaaataagaggcagttggatggtaat
tcagcagaagagattgataataaggctccaatagaagaaattgaggcagaggcaagaaat
gacatatactctagtgccaagaaacgaatgaatttaaacagagatatgataaaggaagca
gtggaaaatgctgaagacattctgaagagaagcttgaaagaaggcataaaaaaagatgtt
gcaactggctctaagtctaacattgaacttcatttcaaacaaataatggataaaaataca
attacaaatcccaatgggatattacaagttgtaaatatagatgaagtgaatactcatacc
tgcagtttttcaagcaaaatagaatgtatgaagaatggttattcccctgttttggatccc
gtgttcaaagaatttgaagaaagcttccagctggatacccaaacagatagactattacaa
cagccgatggcagatgaaactgttaataagcaacaactcaaagacaaaaaactagtagcc
agtctaacacagaaaaactgcattggtataaagggtaccaatatgtcagaaaaaaattct
atatgtgttaaagataaactagagtgtggaaaaggacattcagcattattgcttggtaaa
gtatcagatgtgggatggcctcaaactgagaaatatccaggaacatcagtttgcttggaa
ccagattcccaattggacagcttcttacggcactatcaaactccaaacttaacagaacaa
cagctcactgttcttccaaacaatatttccttttctctcagccagttcccatctggcgtg
gatataaatgaagcaaatctaaatggcagtgatagtttattgtttgatggagactttaac
cacatagatggctcccagagtggtgataataatgaaaggctcatggagactattccacag
gagctggcaatcccttctttattcaaaagtgctttaaaatatgatgcctcagatgaattg
aaaacaagactgaataaacctatatcaaatgacactatgaaccaaaaattgtcaaatggg
tgtaattatatagcgtcagatactagttctttacatgaagcaaaaatattaaatagcata
gttttacctccttttcataaaaacagcaagactaaaaacccagataagacaataaaaagg
ctaaaaagtagtgaaaagaatgtaagtgaaattccacagaaagattgtgcacaagaaaat
gataaccaaatgaacaaatctggtgttttatttgatttgagtccaggaatgcagaaagtt
ttagatagagggttgagcccttcatatgataaatttgaaatggggccaaacaacgaaatg
aatttaaagttttctaagaatactaaagattcaagaactcttgccctttttcctggtcaa
agtgaattatccttgcacaaagattttggcagaatttgcctaacaaaaagtaaagctaat
caaaaaaacaaaaatggaaaacgtgtttcttggatagatgggaacaaaatgcctccttca
ccactgaatgtcatggagtctactccacaatgcatagaaatacccgttgtgacaaaagca
aaaaacacaatctcaacagataaagttccatatgttcggttcttacagaaggataaatct
gatttacacacagaggaacaagtattacaacatcaaccagaaaattcagaacacgttgag
cttaatcttgaggataattcagtgataagtgaagatttttcactccatttatctcaagaa
aaaaatcctccagcatcttgcagtgctgataatttttcaataattgatgtggcaaatgat
aaaactctcttccaaacgttcattgaagaatggaaaacacacacaaaattttctatctct
gtagcttgtgaaaagacaaaaatccccctgtcttctcacagatcagctattggtgcaaag
ttcaagcaaggaggtacatctcataaaagtctctgcgagaatgatggatttcctgttcat
gcctgtgaagacttgctggtagttggcttagccgtgtgctggggtagaaaggatgcttac
tacatctcattgcagcagaactctcaaagccagattgaggtaagtcccagtttggcacag
cctccattggatcaagacctgcctgtagcagaaagattacaacatcttaagcaacgtctg
caggagtctgagagagcattttcacttgttgtgtacaattttattcagcactacaagatt
ctcctgaaggcctgtggcatctcattggcaggttgctttgaggacccaaaggtagcatgc
tggttaatggaccctgaatcaaaagaagattcctttcacaatatggttgccaatttcctt
cttcaggacttattcttgctggacaaaattggagcaggtcagggaaatcagagcctgggt
ctcagtgccagtacagatcagtctggacgatacagggcatctgtagagtctgtccttgtc
ttccatatcatggaaaaactccatattatactgcaaaaggataatttgcaagatattttt
cataaagtggagatgccgaatcagtattgcttggccttgctggagctcaatggaatgggg
tttagcacagtagaatgtgaggcccagaaacatgttatggaagcaaaattgaatgagatt
gagaatcggatataccagctggcaggtcacagtttctccttgacctgtcccgatgatgtt
gctgaggtattatttctggagcaaaagttgccatcagatggagaactaaaaatgcaaaga
ggcaagaaagtgttgggttgtactagaaaagcaacaacaaacaagaatcgggcaaggctg
agtaaacagttcagtacaacaaaggaagttttagaaaaattgaagaaattgcacccttta
cctggcctgattttagaatggagaaggataactaatgcaataaccaaagtgatatttcca
ctacaaagggagaaacttttcaaccctgtcctaggaatggaaaggatctatcctgtttct
caatttcaaagtgctacaggtcgcataagcttcagagaacccaatatacagaatgtacct
aaagacttcgagattgaaatgccaacaatggttgaagagagcccaccttttcaaaaacac
cctcttttaagaagcagatgtggaaaacattctgtgttaccatgtggacctaagagtcta
actgaagaaatatcaaacaggaagaaaatactattttctgttagcatgagacatgccttt
gtaccatttccaggtggcttgatcttggctgctgattactctcagcttgagttaagaatc
cttgcacatttttgttccgacaatcggctactccgggcctttggtaacaacgttgatgtc
tttagaagcattgcagctgagtggaagaagattaaccccgaagaggttgggaatgattta
agacaacaagctaagcagatttgctatggaataatctatggaatcggagctaaatcctta
ggggagcagatgggtgttcaagaaactgatgctttgtgcttcattgagtccttcaaatcc
agatatccaggtattcagaaattcctgaaagagacagtgaagaagtgtacccaggatggg
tttgtgcag

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