Thamnophis sirtalis (common garter snake): 106553032
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Entry
106553032 CDS
T06107
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00310
Lysine degradation
tsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
106553032 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106553032 (PRDM2)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106553032 (PRDM2)
Enzymes [BR:
tsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
106553032 (PRDM2)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106553032 (PRDM2)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
106553032 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_6
SET
zf-C2H2_11
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
106553032
NCBI-ProteinID:
XP_013926925
UniProt:
A0A6I9YTD9
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MNQNPTGPSGTVETLADVPQHILQGLPEEVRLLPSTVDKARLGVWATKPIFRGRKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPAKGNWLRYVNWARSGKEQNLFPLEINR
TIYYKTLKKKAQEAKNRGKKARDRKRKPPLEGLSPFDMRETKEGQKPEDEAPAVSVVLPL
DQAAIIQEMVNQDVLPSLLISSAASELPTMHEDQPEALLCGSKVLEEGPERREERDEEEE
QEPLEEAGEEEDEEEPQEEEEEDEESLSKDHPDVESGSGCGDRLVESVEEQSSLSEDSPE
SSPKKKPSGKCPKARGEPSTQGGAPMFPCQHCERKFTTKQGLERHVHIHISAISHAFKCR
YCGKAFGTQINRRRHERRHEAGPKRKLLSPLASAQLPGATSTPVAEGGVPNEAKARQEGP
APEAEGAASKTPPLEESKEPKESHPCQYCRKVFGTHTNMRRHQRRVHERHLIPKGVRRKP
EEPQASVGPAQHAPSTYLASTDLEEEEEEEEGEADDVMDVSSNISENLNYYIDGKIPSNS
STSNCEVIEMEPGATEVFGINCLLNPVTVEISPNVKAVPVHLVEESKESPVGGTPEAKKR
RTASPPLLAKVKTETEPEPITSLCSLTIPLTLSTVESLPFPREKSVYLSSKLKQLLQTQD
NSKGAPSPPLPVGEIPKLGLPAASSPLLPASSSRFKRRTSSPQHSPGLREPGKAGEGKAP
WTEVALSAKPPKLERRSNSPAWSLSGREEREAPNPEEYKASREWAPSPPFGNVCNQQPLD
LSSSVKQRLSGKNRAQAPWESVLDLSVHKKPCGDGEGKEAAPPAGGAVKKKPTTSMLQKV
LLNEYNGTGLGPENPPSPGTSPRPNACKVVEAPEPQQGPAPSAPGAELGCCGPTTTEVSL
PPPSTSPAPSASPSHPPCPPMLQAPTPPPPLLPTIPSPLPEDPGSSNPPSSCPSPLSNAT
AHSPLPILSPTVSASPLHSVEPLGCASPGPPTLSSSSPSPXHWWAKRFPVQIPLGWMRDF
GVWWWMTSSPQRTVQPPGEAVHLGGEMTAEWARAPSFPLLVKQN
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacccaaccggaccttcaggaacagttgagactttggccgatgtcccccag
cacatcctccaagggctcccggaggaagtgaggctcctcccgtccactgtggacaaggcc
cggcttggtgtctgggccacaaagcccattttcagaggcaggaagtttggccccttcgtt
ggcgacaagaagaaaaggtcccaagtcaaaagcaatgtgtacatgtgggaggtctactac
ccaaacttggggtggatgtgtgtggacgccacggaccctgcgaaggggaactggttgcgt
tatgtgaactgggcgcgttcaggaaaggagcagaatcttttccccttagaaatcaatcgg
accatttactacaaaacattaaagaaaaaggcccaggaggctaagaacagagggaagaaa
gccagggacaggaagcggaagcctcccctggagggtctcagccctttcgacatgagggag
accaaggaaggccagaagccggaggatgaagccccagcggtttccgtggtgttgcccctt
gaccaggccgccatcatccaggagatggtgaatcaggacgtgctccccagcctgctcatc
tccagtgcagcctccgagctgcccaccatgcatgaggaccagccggaagccctcctgtgt
ggatcaaaggttttggaagagggtccggagcggcgggaggagcgggacgaggaagaagag
caggagcccctggaggaagcgggagaggaagaagacgaggaagagccgcaggaggaggaa
gaggaggacgaggagagcttgtcgaaagaccatccagacgtggaatcgggatcgggatgt
ggggaccggctggtggaatctgtggaggagcagagcagcctctccgaagactcccccgaa
agctcccccaagaagaagccctcagggaagtgtcccaaggccagaggggagcccagcacc
caggggggggcgcccatgttcccctgccaacactgcgaaaggaagttcaccaccaagcag
ggcctggagcgccacgtacatatccacatttcagccatcagccacgccttcaagtgccgc
tactgtggcaaggccttcggcacgcagatcaaccgtcggcgtcacgaacggcgccatgag
gccgggcccaaacggaagctgctctcgcccttggcctctgcccagctgcccggggcaacc
agcaccccggttgccgaagggggtgtcccgaatgaagccaaggccaggcaggagggccct
gccccggaggccgagggagccgcttccaaaacaccgcctttggaggagagcaaggagccc
aaggaatcgcacccgtgccagtactgcaggaaggttttcggcacccacaccaacatgcgt
aggcaccagcggagggtgcacgagcggcacctcatccccaaaggggtcaggagaaaaccg
gaggagccccaggcttccgtgggcccggcccagcacgcccccagcacatacctggccagc
acagacctggaggaggaggaggaggaggaggagggagaggctgacgacgtcatggacgtc
tccagcaacatctcggagaatctcaactactacatcgacggcaagatcccgtccaacagc
agcaccagcaactgcgaggtgattgagatggagcctggcgccactgaggtcttcggcatc
aactgcctgctgaatcccgtgacggtggagatctcccccaacgtcaaggcggtgccggtg
catctggtggaggagtcgaaggagtcccctgtgggcgggacccccgaggccaaaaagagg
agaacagcgagccccccgctgctggccaaggtgaagacggaaacggagccggagcccatc
acctcgctgtgttctttgacgattcccctcaccctctcgaccgtggagagcctgcccttc
cccagggagaaaagcgtctatttatcctccaagctgaagcagcttcttcagacgcaggac
aacagtaagggggccccctctcccccgttgccggtgggggagatcccaaagctggggctc
cccgcggcctcctcccctctcctcccggccagctccagcaggttcaagcgccgtaccagc
tccccgcagcacagtccgggccttcgggagcctgggaaagccggtgagggcaaggcccct
tggaccgaggtggccctgagtgcgaagcctcccaagctggagagacggagcaactccccc
gcgtggagcctgtccgggagggaggagagggaggcgccgaatccagaggaatacaaggcc
tccagggagtgggcgccaagccccccctttgggaacgtctgcaaccagcagcccctggac
ctctccagcagcgtgaagcagcggttgagcgggaagaaccgggcccaggcgccctgggag
tccgtgctcgatctcagcgtgcacaagaagccgtgcggcgatggagagggcaaggaggcg
gctccgccagcagggggcgccgtcaagaagaagcccaccacctccatgttgcagaaggtc
ctgctcaacgaatacaacgggacgggcctggggcctgaaaaccccccctccccaggcacg
agccctaggccgaatgcctgcaaagtagtcgaagccccagagcctcagcagggcccggct
ccctcagccccaggagcagagttgggctgctgtggccccaccaccactgaggtgtctttg
ccgcccccctcgacttccccggccccatcggcctctccctcccatcctccctgtcctccc
atgctccaggcccccacgcctccccctcctctccttcccactatcccttcgcccctcccg
gaagaccccggcagcagtaaccccccgagctcctgcccctctcccctgtccaatgccacg
gctcactccccattgcccatactttcccccactgtctcggcctcccctcttcattctgta
gagcctctcggctgcgcttcacccgggccccccactctctcttcctcctccccctccccc
ngacactggtgggcgaaacgtttccctgtccagattcccttgggctggatgagagacttt
ggggtttggtggtggatgaccagctccccgcagaggacggtgcagcccccaggagaggcc
gtccatctggggggggagatgacagcagagtgggcaagagccccttcctttcccctcctt
gtaaagcagaactga
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integrated database retrieval system
