Thamnophis sirtalis (common garter snake): 106553099
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Entry
106553099 CDS
T06107
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106553099 (TRPC4)
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106553099 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
BAR_4
YVC1_C
Motif
Other DBs
NCBI-GeneID:
106553099
NCBI-ProteinID:
XP_013927006
UniProt:
A0A6I9YS75
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MAQFYYKRSINAPYRDRIPLRIVRAESELSPAEKAYLNAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEFIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPTLLDTQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKAE
YEELSQQCKQFAKDLLDQTRSSRELEIILNYRDDNSLLEEQSENDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRHHWAVKMLTCIIVGFLFPAFSVCYLIAPKSRLGLFIK
KPFIKFICHTASYLTFLFFLLLASQHIDRSDLNMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYVHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLLARQSWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEPDRCKGIRCENQNNAFSTLFETLQSLFWSIFGLINLYVTNVKARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLLRWLWRRLCRQNIKKTTKSFGTIGRRAADNLRRHHQYQVTNFLFCSLQSNL
FNATKSDAFAIMSLEFRY
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctattataagagaagcatcaatgccccttacagagatcgcatccctctt
cgcatcgtacgagcagaatctgaactctcccctgctgagaaagcctatttgaatgctgta
gaaaaaggagattatgccagtgtgaagcaagccttggaagaggcagaaatttatttcaag
atcaatataaattgcattgatcctcttggaagaacggctctcctcattgcaatagaaaac
gaaaacctggagttcatagagttgctcctgagctttaatgtctatgttggagatgctctg
ctacatgccataaggaaagaggtggttggtgcagttgagctactcctcaatcacaagaag
cccagcggggaaaaacaggtaccacccacgctactggatacacagttctctgaatttaca
ccagacataacacccattatcttggctgcccatacaaacaattatgagatcataaaactt
ttagtccagaaaggtgtgtctgttcccagaccacatgaagttcgctgcaactgtgtggaa
tgtgtctccagttcagatgtggatagccttcgccattcccgatccagactaaatatctac
aaggctcttgcaagcccatctttaattgctctatcaagcgaggacccatttcttacagca
ttccagttaagttgggaacttcaagaactgagcaaagtggaaaatgagtttaaagccgaa
tatgaagaattgtcacaacagtgcaagcagtttgcaaaagatttgttggatcaaactcga
agttcaagagaattggaaattattcttaattacagagatgataacagtctactagaagag
cagagtgaaaatgatttggcaagattaaaactagcaattaaataccgtcaaaaagagttc
gttgcccaaccaaactgtcaacagttacttgcctctcgttggtatgatgagttcccgggc
tggaggagacaccactgggcggtgaagatgctgacttgcatcattgttggattccttttc
cccgcattctccgtctgctacttgatagcccccaagagccgactggggctgttcatcaag
aagccattcatcaaattcatctgccacacggcctcctacttgactttcttgttttttctt
ctcctggcctctcagcacatcgacaggtcagacctgaacatgcaaggccctcctccaacc
atcgtggaatggatgatcttgccatgggtcttgggatttatttggggtgaaattaaacaa
atgtgggatggtggcctgcaagattacgttcatgactggtggaatctgatggattttgtt
atgaactctctatacctggcaacaatatcactgaaaatagttgcattttcaaagtacagt
gggctgcttgcaagacagagctgggatatgtggcatccaacactggtcgcagaggccctc
tttgctattgcaaacattttcagttctttgcgcttaatatcgttattcactgcaaactct
cacttgggaccactgcagatctctcttggaagaatgctgctggatattctaaagtttctc
ttcatctactgccttgtactgctggcttttgcaaacggacttaaccagctatatttttat
tatgaaacaaatgaacctgatcgctgcaaagggatacgctgtgaaaatcaaaataatgca
ttttcaactctgtttgaaactcttcagtcgctgttttggtcaatctttggactcatcaat
ctgtatgtgaccaacgttaaagctcgacatgaattcactgagtttgttggagccacgatg
tttggcacctacaacgtcatctcactggtggtcctgcttaatatgctgatagctatgatg
aacaattcctaccagcttattgctgatcatgcagatattgaatggaaatttgctcgtaca
aagctatggatgagttactttgaagaaggaggaactttgcccacacctttcaatgtcata
ccaagtccaaaatctctatggtatttgttaagatggctgtggagacgactatgcaggcaa
aacattaaaaaaaccaccaagagctttggaaccattgggagacgtgcagcagataatttg
agaagacaccatcagtatcaggtgacaaatttcttattttgttctctacaatctaattta
tttaatgccacaaagtcagatgcatttgccatcatgtcactagagtttaggtactga
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