Thamnophis sirtalis (common garter snake): 106553166
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Entry
106553166 CDS
T06107
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106553166 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106553166 (SPAST)
Enzymes [BR:
tsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
106553166 (SPAST)
Membrane trafficking [BR:
tsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
106553166 (SPAST)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
106553166 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
Vps4_C
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_14
MIT
IstB_IS21
DUF815
NPHP3_N
AAA_2
nSTAND3
AAA_24
Motif
Other DBs
NCBI-GeneID:
106553166
NCBI-ProteinID:
XP_013927085
UniProt:
A0A6I9YTW1
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MNSPGGRGKKKGLSASSSPTRTAGASPSSAAGSASASHRQQAAVASPHKRNLYYFSYPLF
AVFALLRFLAFQLGLLFAWLCERLSRGGALMAAAKGTSRAGDAPESVRTCHKRAFECIST
ALRIDEDEAAGQKEQAVEWYRKGIEELEKGIAILVIGQGDHYDRARRLQSKMMTNLAMAK
DRLQLLEKMQAVKQIPKLQMEVRSDNTNLVCRNGHLQSENGTVPKKKDPLSHSSNSLPRS
KSVAKAGSGGFSGHQRTPSYTGVSNFSAPRVPSAATQKVTPKNNRTTKPSTPSTAVRKKK
DPKIFKNVDSNLANLILNEIVDSGPSVNFDDIAGQELAKQALQEIVILPSLRPELFTGLR
APARGLLLFGPPGNGKTMLAKAVAAESNSTFFNISAASLTSKYVGEGEKLVRALFAVARE
LQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQEL
DDAVLRRFTKRVYVSLPNEETRLLLLKNLLSKQGNPLTQKELAQLARMSDGYSGSDLTAL
AKDAALGPIRELKPEQVKNMSASEMRNIRLSDFIESLKKIKCSLSPQTLEAYIRWNKAFG
DTTV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggagggagagggaagaaaaagggcttaagcgcctccagctccccgact
cggaccgccggagcctcaccttcatccgcggccggttcggcttccgcctcacaccgccaa
caggcggcggtggcttctcctcacaagcggaatctctactatttctcgtatccgcttttc
gccgtcttcgcgctgcttcgtttcctcgccttccaactcgggctgctcttcgcctggctg
tgcgagcgcctctcccgcggcggggcgttgatggccgccgccaagggcaccagccgggca
ggcgatgcacccgagtcggtacgaacctgtcacaaacgcgccttcgagtgcatctctacg
gctctgcgcatcgacgaagacgaggcggcaggacaaaaggaacaagctgttgaatggtat
agaaagggaatcgaagaactcgagaaaggaatagctatattagttattggtcaaggagac
cattatgatcgagctcggcgcctccagtctaaaatgatgacaaatttggcaatggccaag
gaccgtttgcagctgttagagaagatgcaggcagttaagcaaattcccaagctgcaaatg
gaagtccgtagtgacaatactaacctggtatgccgcaatggacatctccagtcagaaaat
ggaactgttccaaaaaagaaggatccattgtctcatagtagtaattcacttcctcgttca
aaatctgtggcaaaggctggatctggaggattttctgggcaccaaagaacacctagttat
actggagtttctaatttttctgcacctagagttccttcagctgcaactcagaaggttact
ccaaaaaataatagaaccaccaagccttctactccttcaactgctgtacgaaaaaagaaa
gacccaaagattttcaaaaatgtggatagtaaccttgctaatcttattctcaatgaaatt
gtagacagtgggccatctgtcaattttgatgatatcgctgggcaggagttggctaaacag
gcactgcaagaaattgttatccttccttcacttagacctgaattgtttacaggacttagg
gctcctgcacgaggattgttgttatttggcccaccaggaaatgggaagacgatgctggcc
aaagcagtggctgcggaatcaaattcaaccttttttaacataagtgctgcaagtctgaca
tcaaaatatgttggtgaaggagagaaactagtccgtgcactttttgcagtagctagagaa
cttcagccttctatcatttttattgatgaagtggatagtttattatgtgaaagaagagaa
ggtgaacatgatgctagccgacgtttaaaaacagaattcttaatagagtttgatggtgta
cagtcttcaggagaagatcgcattttagtaatgggagcaactaacaggccacaggagctt
gatgatgctgtactcagacgattcaccaaaagagtatatgtatcgttgcctaatgaagag
actcgactgcttttactaaaaaatctcttgagcaaacaaggaaatccattaacccaaaag
gaattggcacagttagctagaatgtcagatggatattcaggtagcgacttaacagcattg
gcaaaagatgcagcgttgggccctatacgagaattaaaacctgagcaggtgaagaacatg
tctgctagtgagatgaggaatattcggctgtcggatttcatcgagtctttgaagaaaata
aaatgcagtcttagccctcaaaccctagaagcttacattcgctggaacaaagcctttgga
gacactacagtttga
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