Thamnophis sirtalis (common garter snake): 106553260
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Entry
106553260 CDS
T06107
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04120
Ubiquitin mediated proteolysis
tsr04144
Endocytosis
tsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106553260
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106553260
09144 Cellular community - eukaryotes
04530 Tight junction
106553260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106553260
04121 Ubiquitin system [BR:
tsr04121
]
106553260
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106553260
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
106553260
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
HECT type E3
106553260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WW
C2
HECT
Motif
Other DBs
NCBI-GeneID:
106553260
NCBI-ProteinID:
XP_013927204
UniProt:
A0A6I9YTB3
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MATGAVDPVYGLSEEEEESRVLRVKVVAGIDLAKKDIFGASDPYVKLSLYVADENRELAL
VQTKTIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTRDDFLGQVDVPLNHLPTEDP
TMERPYTFKDFLLRPRSQKSRVKGFLRLKMAYMPKNGGQEDDNDQREDSEHGWEVVDSAD
SPSQRQEELPPPPLPPGWEEKVDNLGRTYYVNHNNRTTQWHRPTLMDVASESDNNIRQIN
QEAAHRRFRSRRHISEDLDPEPLDSVDVPEPWETISEEVNTSDSLSLTLPPPPASPVSRT
SPQEFSEELSRRLQITPDSNGEQLSSMIQRDPSARLRSCSVTDAVAEQAHLSLQSGPSRR
LRSSTVTGGEDSTPSVAYVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPVVQLAE
DGASGSTSNSNNHLSEPQIRRPRSLSTPTVTLSAPLEGLLKDSPVRRAVKDTLSNPQSPQ
PSPYNSPKPQHKLTQSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLKFPVHLRSKAA
LNPNDLGPLPPGWEERIHLDGRTFYIDHNNKITQWEDPRLQNPAITGPAVPYSREFKQKY
DYFRKKLKKPADIPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYG
GVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAGLAV
YHGKLLDGELNKGG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggccacaggggcggtcgatccggtctacggactttcggaagaagaagaagaatctcgt
gtccttcgagttaaagtcgtagctggaatagaccttgccaaaaaggacatcttcggagcc
agtgatccttacgtgaaactttcgttgtatgtagcagatgaaaaccgagaacttgccctg
gtgcaaacgaaaactattaaaaaaactctaaatccgaaatggaacgaggaattttatttt
agagtaaatccatctaatcatagactgctgtttgaagtgtttgatgaaaatagattgacc
agagacgactttctgggtcaagtggatgtgccacttaatcatcttccgactgaagaccca
actatggaaagaccttatacgtttaaagatttccttcttagaccaagaagtcaaaaatct
cgagtaaaagggtttttgaggctgaagatggcttacatgccaaaaaatggtggtcaagag
gatgacaatgatcagagagaagattcagagcatggctgggaagtagttgactccgcagat
tccccttctcagcgccaggaagaattacctccacctcccttacctcctgggtgggaagag
aaagtggataaccttggacgcacctactatgtcaatcataataacagaacgacacagtgg
catcgaccaactttgatggatgtggcttctgaatctgacaataacatcaggcagataaac
caggaggctgcccaccgaaggtttcgatcaaggagacacattagtgaggatttggaccct
gagcccctggacagtgttgatgtccctgaaccatgggaaaccatttctgaagaagtgaac
acaagtgattccttaagcctgaccttgccccctccgcctgcttcccctgtttctcggacc
agccctcaggaattctctgaggaattgagtagaagacttcagatcactcctgattcaaat
ggggaacaactctcttctatgattcaaagagatccctctgcaaggttgcgatcttgtagt
gtaactgatgctgttgctgaacaggcccatttatcactgcagagtggcccttctagaaga
cttcgttcttccacggtcactgggggtgaagattcgacgccatcggtggcctatgttcat
actacaccgggcttaccttcaggctgggaagagaggaaagatgctaagggccgtacttat
tatgtcaatcataacaatcgcactacaacctggactcgtcctgtcgtgcagcttgctgaa
gatggtgcttctgggtcaacatcaaacagtaacaaccatctaagcgagcctcagataaga
cggcctcgtagcctcagtactcccacagttacattatctgcaccacttgagggacttctc
aaggactctcctgtgcgaagagccgtgaaggacaccctttctaatccacagtctcctcaa
ccatctccatataattctccaaaaccacagcataaattgacacagagtttcttacctcct
ggctgggagatgcgaatagcacccaacggcagaccttttttcattgatcacaacactaag
accacaacatgggaagatccccgactgaaatttccagttcacttacggtcaaaagcggct
ttaaacccaaatgacttggggccccttcctcctggttgggaggaaaggattcatttggat
ggaagaacgttttatatagatcataataataaaattacccagtgggaagatcccaggttg
cagaatcctgctattacaggtccagctgttccgtattccagagaatttaaacaaaaatat
gactacttcaggaagaagttaaagaaaccggctgatataccaaacagatttgagatgaaa
ctccacagaaataatatttttgaagaatcgtatagaagaatcatgtctgtgaagagacct
gatgtattaaaagctagactctggatagaattcgaatcagaaaaaggccttgactacgga
ggtgtggccagagaatggttcttcctgttgtccaaggaaatgtttaacccctattatggg
ctctttgaatattcagcaacggacaactatactcttcagatcaatcctaattctggactt
tgtaatgaagaccatttgtcttatttcacctttattggccgtgttgctggactggctgtg
tatcatggaaagcttttagatggtgagttgaataagggagggtaa
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