Thamnophis sirtalis (common garter snake): 106553277
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Entry
106553277 CDS
T06107
Symbol
EMG1
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106553277 (EMG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106553277 (EMG1)
Enzymes [BR:
tsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
106553277 (EMG1)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
90S particles
Other 90S particles
106553277 (EMG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
C2c1_helical_1st
TetR_C_43
Motif
Other DBs
NCBI-GeneID:
106553277
NCBI-ProteinID:
XP_013927260
UniProt:
A0A6I9YUE1
LinkDB
All DBs
Position
Unknown
AA seq
233 aa
AA seq
DB search
MAASPARKRPHAEGGSADGEGFDPRRAGKRRLVVILEGASLESVKVGKTYELLNCDKHKS
LLLRNGRDPGGVRPDITHQSLLMLMDSPLNRAGLLQVYIHTEKNVLIEVNPQTRIPRTFD
RFCGLMVQLLHKFSVRAADGPQKLLKVIKNPVTDHLPVGCTKIGTSFSAPKVTDMRDLVP
TSEPIAIIVGAFAHGSLNVDYTEKTISISNYPLSAALTCAKITTAFEEMWGVV
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagccccgcgaggaagcgtccccatgcggagggaggctctgcggacggcgag
gggtttgatccccgccgggccgggaagaggcggctggtggtgatcctggagggggcgtct
ctggagagcgtcaaggttgggaaaacatatgaattgcttaattgtgacaagcataaatcc
ttgcttctgaggaatggcagagaccctggaggagttcgaccagacatcacccatcagagc
ctcttgatgctcatggatagtcctttgaatcgagctggccttctccaagtatatatccat
acagaaaaaaacgttcttattgaagtcaatccacagacaagaattcctcgcacctttgat
cgtttttgtggtcttatggttcagctgctgcataagtttagtgtcagagctgctgatggc
cctcaaaagctattaaaggtgataaagaacccagtgacagatcacctccctgtgggctgc
acaaaaattggcacctctttctcagcccccaaggtgacagacatgcgtgacctagtccct
acttcagagcctatagccataatcgtgggagcatttgctcatggatcgcttaatgttgac
tacacagaaaagaccatctctatcagcaactatccactctctgctgctttgacgtgtgct
aaaatcaccacagcctttgaagaaatgtggggagtggtataa
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integrated database retrieval system
