Thamnophis sirtalis (common garter snake): 106553361
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Entry
106553361 CDS
T06107
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106553361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106553361
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106553361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ank_2
Ank
Ank_5
Motif
Other DBs
NCBI-GeneID:
106553361
NCBI-ProteinID:
XP_013927309
UniProt:
A0A6I9YTK6
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MSVVARQRSAKLASDLDGELPLSLAACTNQLNIVKFLLENPYQPANIAEQDSMGNTVLHA
LVEIADDTDDNTKFVTKMYNDVLILGASINPTLRLEEVANRRGLTPLTLAAKTGKIQVFA
YILRREMKEPECRHLSRKFTEWAYGPVHSSLYDLSSIDTCEKNSVLEIIAYSSETPNRHE
MLLVEPLNQLLQDKWDRFVKHLFYFNFFIYTVHILILTVAAYYRPTKKEGTMMLRDLGRF
IMVYLLFHLGFSTAVVTLIEEDDGRPETSPPPDVCPCPVKARPSYNNLYTTCLELFKFTI
GMGDLEFTENYRFKSVFIILLLFYVVLTYILLLNMLIALMGETVNRIAQESKSIWKLQPP
FTFHHTSSEYFRVTGEILSVLGGAYFFFRGIKYFQQRRPSLKAICTECYSELLLYVTQRR
ALLLGGGERDDGGL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggtggcccgccagcggtcagcaaagctggcatcagatttggatggagagctg
cccctctctctcgccgcctgcaccaaccagctgaacatcgtcaagttcctgctggagaat
ccttaccagccggccaacatcgccgagcaggactcgatgggcaacaccgtcctccacgcc
ctggtggagatcgccgacgacactgacgacaacaccaaatttgtcaccaagatgtacaac
gacgtgctcatcctgggggcgagtatcaaccccaccctccgtctggaggaagttgccaac
cgcagagggctgaccccgctcaccctggccgccaagacggggaaaatacaggtcttcgcc
tatatccttcggcgggagatgaaggagccagaatgccgtcacctctctcggaaattcacc
gagtgggcctacggacccgtccactcctcactttacgacctctccagcatcgacacctgt
gagaagaactctgtcttggagatcatcgcttacagcagtgagaccccgaatcgccacgaa
atgctcctggtggaacccctcaaccagctcctgcaggataagtgggaccggtttgtgaaa
catctcttctacttcaacttcttcatctacacggtgcatatcctcatcctcaccgtcgcg
gcctactaccgacctaccaagaaagaaggaacgatgatgctacgagatctgggacgtttt
atcatggtttatctactcttccacctgggattttcgacagcggtggtgacccttattgag
gaagacgatgggcgtccagagacctctccgccgccggatgtctgcccgtgtcccgtgaag
gcccgcccatcctacaacaatctctacaccacctgcctggagctcttcaagttcaccatc
gggatgggcgacctggagttcaccgagaactaccgcttcaagtccgtcttcatcatcctc
ttgctcttctacgtggtcctcacctacatccttctcctgaacatgctgatcgccctcatg
ggagaaaccgtcaacaggatcgcgcaggagagcaaaagtatttggaagctgcagcctccg
ttcacttttcatcacacgagcagtgagtacttccgggtcaccggggaaatcctgagcgtg
ttgggaggcgcctacttcttcttccgagggatcaagtatttccagcaaaggcgcccgtct
ctgaaagccatatgtaccgaatgctacagcgagctgcttttgtacgtcactcagagacgt
gctttgcttttgggggggggggagcgggatgatgggggtctctga
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