Thamnophis sirtalis (common garter snake): 106553411
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Entry
106553411 CDS
T06107
Symbol
PAX6
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106553411 (PAX6)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
106553411 (PAX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
106553411
NCBI-ProteinID:
XP_013927373
UniProt:
A0A6I9YS50
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQ
NVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRL
LSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGTWSTRPGWYPGT
SVPGQPTQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALE
KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP
ISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTMANNLPMQPP
VPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGASGTTSTGLISPGVSVPVQ
VPGSEPDMSQYWPRLQ
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagtcacagcggcgtgaatcagctcggcggtgtgtttgtcaacgggcggccg
ctgccagattcaacccggcaaaaaatcgtggaactggcccacagcggggctcggccgtgc
gacatctcccgaatcctgcagacccatgcagatgcaaaagtccaagtgctggacaatcaa
aacgtgtcgaatggctgtgtgagtaaaattctgggcaggtattacgaaactggctccatt
cgaccgcgggcaatcggaggtagcaaaccgagagtagcgactccagaagttgtaagcaaa
atagcgcagtataagcgggagtgcccctcgatctttgcttgggagatccgagacagatta
ctatcggagggggtctgtaccaacgataatatacccagcgtctcttcgatcaaccgagtc
ctacgcaacctggctagcgaaaagcaacagatgggagcagatggaatgtatgacaagcta
agaatgctgaatgggcagacagggacgtggagcaccaggcctgggtggtacccggggacg
tctgtcccaggacaaccaacgcaagatggctgccctcaacaagaaggagggggcgaaaat
accaattccatcagttcaaatggagaagattcagatgaggcccagatgagactccagttg
aaaagaaagttgcagagaaatcggacgtcctttacccaagaacaaatcgaagcacttgag
aaagaatttgagagaacccattatcctgatgtgtttgccagagagagactagctgccaaa
atagacctgcctgaagcaagaatacaggtatggttttccaacaggagggcaaagtggaga
cgagaagagaaactaagaaaccagagaagacaagcaagcaacacccccagtcacatcccc
atcagcagtagttttagcacaagtgtctatcaaccgatcccacaacccacaacaccggtt
tcctctttcacatcaggttcaatgctgggcagaacagacaccgcgctaacaaacacatac
agtgctttgccacccatgcctagtttcacaatggctaacaacctgcctatgcaaccccca
gtacccagccagacttcctcttattcttgcatgttgcccacaagtccatcagtaaatgga
aggagctatgatacatacacccctcctcatatgcagacacatatgaacagccagccaatg
ggcgcctctggaaccacttcaacaggtttaatttctcctggagtgtcagttcctgttcaa
gttcctggcagtgaacctgatatgtctcagtactggccaaggttacagtaa
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