Thamnophis sirtalis (common garter snake): 106553430
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Entry
106553430 CDS
T06107
Symbol
PKD2L2
Name
(RefSeq) polycystic kidney disease 2-like 2 protein
KO
K04991
polycystin 2L2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106553430 (PKD2L2)
Ion channels [BR:
tsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106553430 (PKD2L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
Ion_trans
Motif
Other DBs
NCBI-GeneID:
106553430
NCBI-ProteinID:
XP_013927399
UniProt:
A0A6I9YTT8
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MYKSETQIHDMMYASLQLAAQAVAFHLLRIVGLRPTAQVAYISDGKWSNVKPRLTHSREL
EMKTTLQELLIYIIFLTDLCILTFGMVSTDMYYLNRVMANLFLETPLSEKDKTIFKTMGS
ITDFWEFLEGPLLDGLYWNTWYTENSTSTYRNSSHIYYENLLLGVAQIRQLKVRNNTCSV
YPSFRAFMRECYGKYSYNHEDRESFGFKNDTAWHYYTSATLAPWHWGLIGLYNTGGFMFI
LSKSKNQSLHMVTFLKEHSWITRGTRVVFIDFSMYNANVNLFCIVRLTMEFPATGGIIPS
WQFHSVKLLRYVTYYDYFLASCEVIFCLFIFTFLIQEFIKMRKLKGDYFRNAWNWLDMLL
LLVSFSISMTLILDTSRDVSRIGDKDLMRHQISSGQYDTVSARDFQRVTNQFSSGFSEFY
AEWVAISFTKAKIPKLPQSPLLFCFRLSRYAEDLERQLKEVNYKLDTVMRTLPPTQYQQM
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaatctgaaactcagatacatgatatgatgtatgcgtcattgcaattggctgcc
caggcagtggcatttcatttgctaaggattgtgggattacggcccactgcccaagttgcc
tatataagtgatgggaaatggagcaatgtgaagcctcgactgactcatagcagagagctt
gaaatgaagacgactctccaagaactattgatctacataatttttctaactgatctatgt
atattgacatttgggatggttagcacagatatgtattacctaaacagagtaatggccaat
ctcttcttggaaacgcccctctcagagaaagataagacaatcttcaaaacgatgggcagc
atcaccgacttttgggagtttttagaaggcccacttctggatgggctttattggaacacc
tggtatactgaaaattccacaagtacctacagaaacagtagccatatctactatgagaac
ttactccttggagtagctcagatccggcaattgaaagtccgtaacaacacttgctccgtt
tacccttcttttcgtgcatttatgagagaatgctacgggaagtatagctacaaccatgaa
gacagagaaagctttggctttaaaaatgatactgcgtggcactactacacttctgctact
ctagctccctggcattggggccttattggcctatataataccggaggatttatgttcatc
ctgagtaaatcaaagaaccaaagtttacatatggtgaccttcctcaaggaacacagctgg
atcacccgaggaacaagggttgtcttcattgatttttcaatgtacaatgctaatgttaac
ctcttctgcatagtcaggctgactatggagtttcctgcaacaggtggcataatcccttct
tggcagttccactctgtaaaacttctcagatacgtcacctattatgattattttctagcc
tcctgcgaagtcatcttctgtcttttcatcttcacattcctcattcaagagtttataaaa
atgcggaaactgaaaggagattattttagaaatgcttggaattggctggatatgttattg
ctcttggtaagtttcagcatttccatgacattgatattggatacaagtagagatgtctcc
agaattggtgacaaggatctcatgaggcatcagatttcttctggacagtatgacacagtt
tctgcaagggactttcagagagtgactaaccagttttcttctggtttttcggaattttat
gccgaatgggtagctatcagcttcaccaaggcaaaaattccaaaactccctcaatctcct
ttgttattttgttttagactttctagatatgcagaggatttggaaagacaactgaaggag
gtaaattataagctggacacagttatgagaactctccctccaactcaataccaacagatg
aactag
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