Thamnophis sirtalis (common garter snake): 106553480
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Entry
106553480 CDS
T06107
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106553480 (TMF1)
Membrane trafficking [BR:
tsr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106553480 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
ThiF
TMF_DNA_bd
ATG16
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
106553480
NCBI-ProteinID:
XP_013927460
UniProt:
A0A6I9YUZ7
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MDTIDVSNLNRQFLFRPKDVGRPKAEVAAEFLNSRIPNCAVVPHYKKIQDLDESFYRRKL
SCPIMKIAIPVLPKFHIIVCGLDSIIARRWINGMLISLLNYEDGVIDPSSIIPLIDGGTE
GFKGNARVIIPGMTACIECTLELYPPQEIKVLKEDLATRLNSNETAELLKEKDEQIKGLL
EEGEKLSKQQLQNSNIIKKLRAKEKERENTNTKQNKKIKELEDELQHLKQVLDGKEEIEK
QHRENIKQLNSVVECQVKDLRRLQVDLEDLEEKNRSAQAALDNAYKELADLHKTNAAKDC
EAQEAALSHEIKVKEELGLILEKAQEEAYQQQEALAIQVTDLRIALQRAEQQAARKEDYL
RQEISDLQQRLQEAETRNQELSQSVTSATRPLLRQIENLQATLGAQTLSWEKLEKNLSER
LGESQAALAAQTERERAATEELLSNKIQLSSTESQNSLLRQENSRLQAQLEAEKSRLKKL
ENENNRYEVELENLKEEYVKVVEGAKKEKMLLSTQLEMEKMKVEQEKKKTIFVQESAREK
ERKLYISSTMETLSSTPTLSRSSSISGVDMAGLQTSFICQDDQYDHSFGSVSASGTNLYD
VMRMGAGSSIIENLQSQLKLRDGEISHLQLEIGNLERTRSVMAEELVKLTNQNDDLEEKI
KEIPKLRAQLRDLDQRYNTILQMYGEKAEAAEELRLDLEDVKNMYKTQIDELLKQRHS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggacactattgatgtatccaacttaaacaggcagttcttgtttcgacctaaagatgtt
gggcgtcctaaggcagaagtcgctgctgagtttctcaatagtcgcattcccaattgtgct
gttgtaccacattataaaaagattcaggacctggatgaaagtttctatagacgtaagttg
tcatgccctattatgaaaatagcaattcctgttttgccaaaatttcatataattgtatgt
ggtttggattcaattattgcaagaagatggataaatggcatgttgatttcccttttaaac
tatgaagatggggtgatagatccaagttctattatacctttgattgatggaggaacagaa
ggttttaaaggaaacgcacgtgtgattattccaggcatgacagcttgtattgaatgtaca
cttgaactttatccaccacaggaaataaaggttctcaaagaagatctagcaactagattg
aacagcaatgaaacagcagaattactaaaggagaaagatgaacaaattaaaggattacta
gaagaaggagaaaaactttcaaagcagcagttacaaaattctaacattattaagaaatta
agagccaaggagaaagaaagagaaaataccaatacaaagcagaataagaaaattaaggaa
ttagaagacgagttgcaacatctgaaacaggtcttggatggcaaagaagaaattgaaaaa
caacatagagagaacatcaagcagctaaatagtgttgttgaatgccaagtgaaggatctt
aggcgacttcaagtagatcttgaagatcttgaagaaaaaaacagaagtgcacaagcagct
cttgataatgcatacaaagaacttgcagatcttcataaaactaatgctgcaaaagactgt
gaagcacaagaagcagcattaagtcatgaaattaaagttaaggaggaactaggtttaatt
ctggaaaaggcccaggaggaggcttatcaacaacaagaagctttagcaattcaggtaaca
gacttgagaattgcattgcaacgtgcagaacaacaagcagctagaaaggaggattattta
cgccaggaaattagtgaccttcagcagagacttcaagaagctgagactcgcaatcaagaa
ctcagtcaaagtgttacatctgcaactaggcctttgctccggcagatagaaaacctgcaa
gctactctgggagcacagaccttgtcatgggaaaaactagagaaaaatctttctgagaga
cttggggaatctcaagctgccttagcagcacagactgaaagagaacgtgctgctacagaa
gaacttctttccaacaagatccaactttcttccactgaatcacaaaatagtctcctgagg
caagaaaacagtcgccttcaagctcaactcgaagcagaaaaatccaggctaaagaaacta
gaaaatgaaaacaataggtatgaagttgagctagaaaatcttaaagaagaatatgtaaaa
gttgttgaaggggcaaagaaagaaaagatgttgttatctactcagttagaaatggaaaaa
atgaaagttgaacaagaaaaaaagaaaacaatatttgtccaagaatctgcaagagaaaag
gagcgtaaattatacatttcatcaacaatggaaactttgtccagcaccccaactctctca
cgatcaagctccataagtggagttgatatggcaggactccaaacctccttcatatgtcag
gatgaccagtatgaccattcctttggttcagtgtctgcaagtgggaccaatctgtatgac
gtaatgagaatgggagcaggttcaagtattatagaaaatcttcagtcacaattaaagtta
cgggatggagagatttctcatctccagttggaaattggaaatcttgaaagaactcgatca
gttatggctgaagaactggtgaaattaacaaatcaaaatgatgacttagaagaaaaaatt
aaggagatccccaagttacgtgcacaattaagggatttggatcaaagatacaataccatt
ctgcagatgtatggagagaaagcagaagcagcagaagaattgagattggaccttgaggat
gtaaaaaatatgtacaagactcagattgatgaacttctgaagcaaaggcatagctaa
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