Thamnophis sirtalis (common garter snake): 106553551
Help
Entry
106553551 CDS
T06107
Symbol
NKX1-1
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106553551 (NKX1-1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
106553551 (NKX1-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
DUF1155
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
106553551
NCBI-ProteinID:
XP_013927553
UniProt:
A0A6I9YSM4
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MNVRRDEAQVGDVYIPAPTAAAAGSPPERLLGEPGSWREDGMESHAEQRLAPSGDLPPVY
SCPVSRDRPGSENGGSSTLPGPEGAGAAGAVVHRTTPFSVLDILDPNKFNSKGRRQCALL
YKAANAAAGTDFALAADEKPEEAGGDPNAASEDFQAGRRKPSLDGRKPGELYPSDEVGLE
PVHRESPLPESEAPDEEEEEDEEDEEELGSEGSCNSDGSAVEAARGLGAEEGQSPQRQPA
GAAPGLPPQPQPQPQPSPPQGQAATPPSGGKTKRKRPGSDSKSGKPRRARTAFTYEQLVA
LENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGG
GGGVGGGGGGAGGLSGALSPLSHSPPMVNHGLAMHGPPGAYSHSAGGLVCAAQLPFLPGP
AAVLSPFVLGSQTYGAPAFYTPHL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgagacgagacgaggctcaggtgggtgacgtctatattccggcaccgacagcg
gcggcggcagggagccctccggagcgcctcctgggagaaccgggcagctggcgggaggac
ggcatggagagccacgcggagcagcgcctggcgcccagcggcgacctgccccccgtctat
tcgtgcccggtgagccgggacaggccgggaagcgagaacggcggcagcagcacattgccg
gggccggagggggcgggcgcggcgggggccgtggtgcaccggaccacccccttctccgtg
ctggacatcctggaccccaacaagttcaatagcaagggccgaaggcaatgcgccctgctc
tacaaggcggcaaacgcggcggccggcaccgacttcgcgctggcagccgacgagaagccg
gaggaggcgggcggcgaccccaatgctgcgtccgaagacttccaggccggcaggaggaag
ccctcgctcgacgggcgcaaacccggcgagctgtacccgagcgacgaggtggggctggaa
ccggtgcaccgggagagccccctgcccgaaagcgaagcgccggacgaggaggaagaggag
gacgaggaggacgaggaggagctgggcagcgaggggagttgcaacagcgacggcagcgcc
gtggaggccgctcggggactcggcgccgaggaaggccagagcccacagaggcagccggcc
ggagccgctccggggctcccgccacagccgcagccgcagccgcagccgtcgccgccccag
ggccaggccgccaccccgccgtcggggggcaaaaccaagcggaagcgccccggctcggac
tccaagtcgggcaagccccggcgggcgcggacagccttcacctacgagcagctggtggcg
ctggagaacaagttcaaggccacgcggtacctgtcggtgtgcgagcgcctcaacctggcc
ctttcgctcagcctgaccgagacgcaggtcaagatctggttccagaaccggcgcaccaag
tggaagaagcagaaccccggcgccgacaccagcgccccgacgggcggcgggggcggcggg
ggcggcggggtggggggcggcggcgggggcgcgggcggcctgtccggggcgctgagcccg
ctcagccactcgccgcccatggtcaaccacggcctggccatgcacggcccgcccggagcc
tacagccactcggccggcgggctggtgtgcgccgcccagctgcccttcctgcccggcccg
gccgccgtcctctcgcccttcgtgctgggttcgcagacctacggcgcgcccgccttctac
acgccgcacctctga
DBGET
integrated database retrieval system
