Thamnophis sirtalis (common garter snake): 106553602
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Entry
106553602 CDS
T06107
Symbol
CD44
Name
(RefSeq) CD44 antigen
KO
K06256
CD44 antigen
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106553602 (CD44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106553602 (CD44)
04090 CD molecules [BR:
tsr04090
]
106553602 (CD44)
00535 Proteoglycans [BR:
tsr00535
]
106553602 (CD44)
00536 Glycosaminoglycan binding proteins [BR:
tsr00536
]
106553602 (CD44)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106553602 (CD44)
Exosomal proteins of other body fluids (saliva and urine)
106553602 (CD44)
Exosomal proteins of colorectal cancer cells
106553602 (CD44)
Exosomal proteins of bladder cancer cells
106553602 (CD44)
CD molecules [BR:
tsr04090
]
Proteins
106553602 (CD44)
Proteoglycans [BR:
tsr00535
]
Cell surface proteoglycans
Others
106553602 (CD44)
Glycosaminoglycan binding proteins [BR:
tsr00536
]
Hyaluronan
Cell surface receptors
106553602 (CD44)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Motif
Other DBs
NCBI-GeneID:
106553602
NCBI-ProteinID:
XP_013927615
UniProt:
A0A6I9YVF9
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MAKFWLCAAVGFYVLLQLCEARMDLNISCRYAGVFHVEKNQRYSLTREEAVELCQALNST
IPTSEQMDKAFTLGFETCRYGYIEGKIVLPRHTPYSLCAANNTGVYVLTSNISDRYDTYC
FNSSESRDVVCEPVEKLYSDLPNNNSSIEIYNADGSRYIEGKKVTERPRVTEDDSSVGSG
SAIGRGTIDPSDFPPEDDITTFTPVYVTEDNGYQHPGNPEDQNPQSTTEENSNHGKHHGN
SSQDQQITENFPLWLPSEEHKGMQNTTTSKDQSFEDDDDGGGDDDEEGSGQKNPETVLEW
DNSGDKELQTSNTTVNSTKDVKQEESSHNILLPAVHSGRDSEVRYSTNDTIADVLPGIVE
QYSTTTAVSSSDDFFKQEDSKQPQLEGASPELEIEDTVSPAINTSDELHPEFSASDEKES
TLEKESFHHPDAGFYGTKEDPTSEPMRQWVSENKYTTKPTMDVLFPGIVPRREINQKNKT
DHTGPDPNKHSSVVRGKNVTPLPEESGKSQPRMAHIPDWLIVVASLLALALILGVCIAVN
SRRRCGQKKKLVINNGKGGIDEKKKDGLNGEASKSQEMVHLVHKEKPEDQKCPQDEFQAI
DETQNQQDVPLKSGM
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttctggttgtgtgcagccgttggattttacgtgttgctgcagctttgcgaa
gcccgaatggatttgaatataagttgtagatacgcaggtgttttccatgtagagaagaat
caacgctacagtcttacgagagaagaggctgttgagctttgccaagcacttaatagtacc
atcccaacatcggaacaaatggacaaagcttttaccctcggttttgaaacttgcagatac
ggttatatagaaggcaaaatcgtacttccccggcatactccttattcactctgtgcagca
aacaacacaggagtttatgtacttacttcaaatatttctgaccgatacgatacatattgc
ttcaattcatcagaatcaagagatgtggtttgtgagccagtagaaaagttatattctgat
ttgcctaataataacagcagtattgaaatttacaatgctgatggatcacggtacattgaa
ggaaagaaggtcacagaaaggccacgagtaactgaagatgacagcagtgtgggcagtggt
tctgcaattggcagaggaactatagatcccagtgacttcccaccagaggatgatatcaca
acatttacaccagtatacgtaacagaggacaacggttatcagcatccaggaaatcctgaa
gatcagaatccccagagtactactgaagaaaattcaaatcatggaaagcaccatggaaat
tctagtcaagatcagcaaatcactgaaaattttccattatggttgccatctgaagaacat
aaaggaatgcagaatacaaccaccagcaaggatcagagttttgaagatgatgatgatggt
ggtggtgatgatgacgaagaagggtctgggcaaaaaaatcctgaaacagttcttgagtgg
gacaacagtggtgataaggaacttcagacgtcaaataccactgtgaactccaccaaagat
gtcaaacaagaagaatcatcccacaatatattgctacctgctgtacattctggaagggac
agtgaagtcagatactcaacaaatgacacaattgcggatgtcctacctggaattgttgaa
caatattcaaccactactgctgtgtcctccagtgatgatttcttcaagcaggaagactca
aagcagcctcaactggagggtgcatcccctgagctggaaattgaagacacagtatcccct
gcaatcaacacttcagacgagttacatccagaattttctgcttctgatgaaaaagaaagt
accctggaaaaggaatcttttcatcacccagatgcgggcttttatggcaccaaagaagat
ccaacttcagaaccaatgaggcaatgggttagtgaaaacaagtatactacaaaacccaca
atggatgtcttgtttcctggaatagttcctcgaagagaaataaatcaaaaaaataaaact
gatcatacaggtcctgatccaaacaaacactccagtgtagtgagaggcaaaaatgtaaca
cctttgccggaagagtcaggaaaaagtcaaccacgaatggctcatataccagattggctt
attgtagttgcttctcttttggccctggcattgattcttggtgtttgcattgctgtaaac
agtcgaaggagatgtgggcagaagaagaagcttgtgattaacaatggtaaaggaggcata
gatgagaaaaagaaagatgggttaaatggagaagccagcaaatctcaggaaatggtgcac
ttggtacacaaagagaagccagaagaccaaaagtgcccacaggatgaattccaggcaatt
gatgaaacacagaaccaacaagatgtgcccttgaagagtggcatgtag
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integrated database retrieval system
