Thamnophis sirtalis (common garter snake): 106553631
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Entry
106553631 CDS
T06107
Symbol
ZBED4
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106553631 (ZBED4)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
106553631 (ZBED4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Flu_PB2_4th
Motif
Other DBs
NCBI-GeneID:
106553631
NCBI-ProteinID:
XP_013927640
UniProt:
A0A6I9YVI4
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MDTNIAESPQISDNLMMDKINNLKVEPEDDSNCILETIDIKTEKIDSSDEQDDREKNFVR
NNSDKFISAENEDDYGSLFSQYSSTLYDVAMEAVTQSLLSNRNISSRKKSPAWNHFFISP
RDSTKAICMYCMKEFSRGKNEKDLSTSCLMRHVRRAHPTVLIQENGNIPAISSFSSSPTL
LLPPQPADTGDLTHVLTPIKLIKKTCSKIPSPDQIIEESVPIVSIEEIPSDLSHTEKNIK
EEAGVGLSLHVPNSQYEEMDNIAEKTVQIPKTTSGSRRRSAVWKHFYLSPLDNSKAVCIH
CMNEFSRGKNGKDLGTSCLIRHMWRAHRSIVLQENGGGSTIPPLYSAPPTLLPPLLASDG
DPSSVSSGKLAKEPTSVCSSPDRIAEENNSNLPLGDTLMEDSSLFSSSEDIGEASLVSSP
EKSRLLLEHGSVFHQNKRIMRKLKAEVWNHFSLSPGDKLKVICRHCSCILNHGKKGDLGT
SYLTKHLYRRHPEIIGIQKNFIDVSLANSPYATLASAERSASKLTDLPTMVTNETQVIFP
VSSKKTSKLWNHFSICSADSTKVICMHCGRTISRGKKPTNLGTSCLLRHLQRFHNHVLKP
DASEPVLSSSTNNHVPLSTDLLGSSSFDETTDKFSDTHPVAKKITSLVAEMIALDLQPYS
FVDNIGFNRLLEYLQPQYSLPSPSYFSHTAIPDMYDSVKEIIVSHLKEVESGVVHFTSGI
WMSNQTREYLTLTAHWVTFGSRVRPQCEDYHCSALLNVSQIDCDYNGISIQKQLEYWWET
WITSIGLQIGITVTDNQTIGKTLNEGEHSSVQCFCHTLNLIVNEAIKSQRMVQNLLSIAR
KICERVHRSSKAKEKLAELQKEYHLPQHQLIQDVPSKWNTSFHMLERLIEQKRAIDEMSI
ECSFRELISCDQWEVMQSVCHALKPFEVASREMSTHMSTLSQVIPMIHILNRKIELLFEE
TMGIDTMLKSLKEAMVSRLSSILHDPRYIFATLLDPRYKTSLFTEEEAEQYKQDLIRELE
ILNATSDDDKPVSNGCGKGSSSKISYGNNSLWSLMEDMTKAKPPKEKTKLPQEMVLLYLE
EEVLEHNYDPLTYWNFKKSSWPVLSKLAVRFLGCPPSIVPSERLFSTSNESISFSQSRLT
MEHFEKLIFLKVNLPLIYFQY
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaatatagcagagtctccacaaatcagcgataatttaatgatggataaaatc
aacaatttaaaagtggaaccagaagatgatagtaattgtattttagaaacgatagatata
aaaactgaaaagattgatagcagtgatgaacaggatgacagagaaaaaaattttgtccgt
aacaactcagacaaattcatctctgcagagaatgaggatgattatggttctcttttttcc
caatatagcagtactctctatgatgtagcaatggaagctgtaacacagagtcttctttca
aatagaaacataagctcccgaaaaaagtcccctgcttggaaccacttctttatatctcct
agagacagtaccaaagcaatatgtatgtactgtatgaaagaatttagcagaggtaaaaat
gagaaagacttaagcacaagttgtctaatgaggcatgtgaggagagctcatccaactgta
ctcattcaggaaaatggaaatataccagctatatcttccttttcttcatctcctacatta
ctattgccacctcagcctgcagatactggagatttaactcacgtgctaactcctataaaa
ttgattaagaaaacttgttctaagattccatccccagatcaaattattgaggaatctgtt
cctatagtttctattgaagaaataccttcagatttgtcacatactgaaaagaacattaaa
gaagaagctggtgttgggttgtcactacatgtgcccaacagtcaatatgaagaaatggac
aatatagcagagaaaactgttcaaattcctaagactacatctggctcaaggagacgatct
gctgtatggaaacatttttatttatctcctctggataactcaaaagctgtctgcattcac
tgtatgaatgaattcagcagaggaaagaatggaaaagatcttggaacgagctgcttaata
cgccacatgtggagagctcatcgttctattgttctacaggagaacggaggaggttcgacc
ataccccctctgtactctgctcctccaactttattaccacctttattagcttcagatgga
gacccaagttctgtatcatctggaaaattagctaaagaaccaacatctgtttgctcttct
ccagacagaatagctgaagaaaataattccaatcttcctttgggagatactctgatggag
gattcctcattgttttcatcatccgaagatataggggaagcgtctttagtttcttctcct
gaaaaaagccgattgttattggagcatggctctgtttttcatcagaataaacgcataatg
cgaaagctgaaagctgaagtatggaatcatttttctttgtctccaggggataaactaaaa
gttatatgtagacactgcagctgtatattaaaccatgggaaaaaaggtgatttaggcaca
agttatttgacaaaacacttatacaggcggcatcctgaaattataggaatccaaaagaac
tttatagatgtcagtttagcaaattctccttatgctaccttggcttctgcagaacgttca
gcttcaaaactgactgacttgcccacaatggttactaatgaaactcaagtcatatttcct
gttagtagcaaaaagacctcaaaactgtggaaccatttttcaatttgttctgcagattca
actaaagtaatatgtatgcactgtggacgtacaataagtcgagggaaaaagccaaccaat
ttgggtaccagttgccttttaagacatttacaacggtttcataatcatgtcctaaaacca
gatgcctcagagccagtattgtcctcttctacaaataatcatgtacctctgagtacagat
cttttgggatcttcatcttttgatgaaaccactgacaagttttctgacacgcatcctgtt
gccaaaaaaattacaagtcttgtcgctgaaatgattgcacttgatcttcagccatattct
tttgtagataatattggttttaatagattgcttgaatacttgcaacctcagtattcattg
ccttcaccatcttatttttctcatactgcgatccctgatatgtatgacagtgtgaaagaa
ataattgtttcacatcttaaagaagttgaaagtggtgtagtccactttacctctggaata
tggatgagcaatcaaactcgggaatatctaaccctcacagctcactgggtaacatttggg
tcacgagttcggcctcagtgtgaagattaccattgttcagctttattaaatgtttcacag
attgattgtgactataatggtatcagcattcagaagcaactagaatattggtgggaaacc
tggataacctcaattggactacagattgggattactgttacagataatcagacaatagga
aaaactttaaatgaaggggaacattcaagtgtgcaatgcttctgtcacacactgaatctc
atagtgaatgaagctattaaaagccagaggatggttcagaacctacttagcattgccaga
aagatatgtgaacgtgtccatcgctcatccaaagcaaaagagaaattggcagagttgcag
aaagaatatcatttgccacagcatcagctaatccaagatgtcccatcaaaatggaataca
tcatttcatatgcttgaaaggctaattgaacagaaaagagctattgatgaaatgtctata
gagtgtagtttcagggaattaataagctgtgatcagtgggaagtgatgcagtctgtctgt
catgcactcaaaccgtttgaagttgcaagtagagagatgagtacacatatgtccacttta
agccaagtaattccaatgattcatattctaaaccggaaaatagaactactgtttgaggaa
acaatgggcatagatactatgctaaagtccttaaaagaagctatggtgagtagattatcc
tccatactccatgatccaagatacatttttgctacacttttagaccctcgttataagacc
tccttattcacagaagaagaagcagaacagtataaacaggacttaatcagggagctagaa
atactaaatgctacctcagatgatgataaaccagtttccaatggttgtggtaaaggttca
tcatctaaaatctcttacgggaacaatagtctttggtcactaatggaagatatgacaaaa
gcaaaacctccaaaagaaaagactaagttgccacaggaaatggtgcttttatatctggaa
gaagaagtgcttgagcataactatgatcccctcacttactggaattttaagaaatcctct
tggccagtattgtcaaaattggctgttcgtttcctaggttgtcctccaagcatcgttcca
tcagagagattattcagtacatccaatgaaagcatcagctttagtcaatcaagactaaca
atggaacactttgaaaaacttatatttttgaaagtaaatcttcctttgatatacttccag
tattga
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