Thamnophis sirtalis (common garter snake): 106553639
Help
Entry
106553639 CDS
T06107
Name
(RefSeq) laminin subunit alpha-3-like
KO
K06240
laminin, alpha 3/5
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04382
Cornified envelope formation
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106553639
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106553639
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106553639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
106553639
NCBI-ProteinID:
XP_013927653
UniProt:
A0A6I9YSX9
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MARRTRVAAALLASRTAPGAALARVVLALWSCCHPAGSLSASSLDAGERALSLHPPYFNL
AETTRIWATATCGQDESGRPRLELFCKLVGGPAASPAGQTIQGQFCDYCNAADPNKAHPI
DYAIDGTERWWQSPSLSLGLKYDEVNVTLDLGQLFHVAYVLIKFANSPRPDLWVLEKSID
FGRTYTPWQYFAYSKAGCWERFRKEANSPLRKDNDVICTTEYSRIVPLENGEIVISLVNG
RPGANDFSHSSILRDFTKATNIRLHFLRTNTLLGHLISKAQRDPTVTRRYYYSIKDISIG
GQCVCHGHADVCAAKTDPDSYRYQCECQHNTCGETCNRCCPGYNQKSWQPATASSPNLCE
PCNCHGHAFDCYYDHEVERRKESLNLNGQYQGGGVCIDCQHNTAGINCEKCLKGYYRPYG
VPVTAVHGCIPCRCTSEHTNGCEEGSGRCYCKLNYQGKACDRCADGYHSFPSCYRIPISP
ATTQNPAVTSPGHVDGSRCRPEYFGTHCQPCQCSVYGSYQDTCHQTTGQCDCRPGFIGQQ
CDRCISTSSTFPHCQGIIDECDPAGTRDSYSGYCQCLQNVEGPTCSICKPLYWNLARANP
YGCIDCQCDVAGVLSGIRECQQLDGDCYCKLNVCGGPCDTCEAGYYGLETKNYFGCQGCK
CDVGGSVSHVCNDLTGDCQCRRHIIGKTCMEAEKNYYLPDLHHMKFEIEDGTSPNGREVR
FGYNPQEFPGFSWRGYVPMSSIQNEVRITLSVKKPKPYLFHVILRYINPGTAIVSGHITA
YQSRTLKGTHQSKEIFFPLSREPTFVTVPGKGFADSFLLGPGTWIFKIRVEGVLLDYLVL
LPRDYYEASILQFPVVQPCTYSGYVTTDNCLQYENLPVNKYRCVFGTEVTFFLHGGEYQK
TTFQQPTIKHPVMSHISGQEVNLQIKLKVPQVGRYVIIFEYVTDHDLMYVGNIKTESIGQ
EMEAKINIYSCKYR
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaggacccgggtggcggcagctctcttggcttcgcgaacggcgccaggcgca
gcgttggcaagggtcgtcttggcgctctggtcctgctgccaccccgcgggctccctctcg
gcttcttccctggacgccggggagagggcgcttagtctccacccgccttacttcaacctg
gcggagacaacccgcatttgggcaactgccacctgcgggcaggatgagagcgggaggccc
cgcctagagctcttctgcaaactggtggggggacccgctgcttcccccgccgggcaaacc
atccagggccagttttgtgactattgcaatgctgctgatcctaataaggctcatccaata
gattatgctatagatggaacagaacgttggtggcaaagtccttctctctccttaggtttg
aagtatgatgaagtgaatgttactttggatctaggacagttgttccatgtggcctatgtc
ctcatcaaatttgcaaattctcctcgtccagatttgtgggtattagagaaatcaatagac
ttcggaagaacatatacaccatggcaatattttgcctattctaaagcaggctgctgggaa
cgtttcagaaaggaagctaacagtcctctcaggaaagataatgatgtcatttgcacaaca
gaatattctcggatagtgcctttagaaaatggagagattgtgatatccttggtaaatggc
cgtccaggagcaaatgatttcagccattcttccatacttagagattttactaaagccaca
aatattcgtttacatttcctcagaaccaacactcttcttggacacttgatctctaaagct
cagcgggatccaactgtgacacgcagatactactacagtataaaagacatcagcattggt
ggacaatgtgtttgtcatggacatgctgatgtatgtgctgcaaaaactgacccagattcc
tacaggtaccaatgtgaatgtcaacacaatacttgtggggaaacctgtaatcgttgctgt
ccagggtataatcagaaaagttggcaacctgcaacagccagcagcccaaatctctgtgaa
ccctgcaactgtcatggccatgcctttgactgctattatgaccatgaggttgaacgacgc
aaagaaagcttaaatcttaatggacagtatcaagggggaggagtctgcattgactgtcag
cacaacacagctggtataaattgtgagaaatgtttaaagggatactatcggccatatggt
gttccagtcacagcagtgcatggatgcataccctgcaggtgtacctctgaacataccaat
ggctgtgaagaaggatcaggtcgctgttattgtaagctgaactatcagggtaaagcctgt
gatcggtgtgctgatggataccatagttttccctcctgttaccgaattcctatctcccca
gctacaactcagaacccagcagtcacttcacctggtcatgtggatggcagtcgttgcaga
ccagaatattttggaacacattgtcagccttgtcaatgttcggtttatggctcctaccaa
gacacatgtcatcagaccacaggccaatgtgattgtcgacctggtttcataggccagcag
tgtgacagatgtatctcaacaagtagtacttttcctcattgccaagggatcatcgatgaa
tgtgatcctgctggaaccagagattcttattctggctattgccaatgcctacaaaatgta
gaaggtccaacctgtagcatctgtaagccactttactggaacctggccagggctaatcct
tatggatgtatagactgccagtgtgatgtagctggagtactaagtggtattagagaatgt
cagcagttggatggtgactgttactgcaaacttaatgtttgtggaggtccttgtgatact
tgtgaagctggttattatggcctggaaactaaaaattattttggatgtcaaggatgcaaa
tgtgatgtgggaggctctgtaagtcatgtctgcaatgacctgacaggggactgccagtgc
agaaggcacataattgggaaaacttgtatggaggctgaaaagaattattacctacctgat
ttacatcacatgaagtttgaaattgaggatggtacgtctcctaatggaagagaagtccgg
tttggttataatcctcaagaatttcctggtttcagttggagaggttatgtgccgatgtct
tcaatacagaatgaagtcaggataactttgagtgtgaagaaaccaaaaccctatttattt
catgttatcttgaggtatataaatcctggtactgcaatagtatctggccacataacagct
tatcagtctcggaccctaaaagggactcatcagagcaaagagatcttcttcccactcagt
agagagccaacttttgtaactgttccagggaaaggttttgcagattcatttttattggga
cctggaacttggatatttaaaatcagggtagagggcgtccttctggattacctcgtcctc
ttacctcgtgactactatgaagcatccatcttgcaatttcctgttgtacagccttgcaca
tattcaggatatgtcacaacagataattgtttgcagtatgaaaacttgccagtgaacaaa
tatcgctgtgtttttggtacagaggtaacatttttcttgcatgggggagaataccaaaaa
acaactttccaacagccaacaatcaaacatccagtgatgtctcatattagtggtcaggag
gtgaatctacagatcaaattgaaggttccccaagttggccgctatgtaatcatctttgag
tatgtcacggatcatgatctaatgtatgttggtaatataaagactgagagcattggacaa
gagatggaggctaaaattaatatatacagctgcaaatataggtga
DBGET
integrated database retrieval system
