Thamnophis sirtalis (common garter snake): 106553696
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Entry
106553696 CDS
T06107
Symbol
NFASC
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106553696 (NFASC)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_5
C2-set_2
DUF6606
Motif
Other DBs
NCBI-GeneID:
106553696
NCBI-ProteinID:
XP_013927726
UniProt:
A0A6I9YUM9
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All DBs
Position
Unknown
AA seq
1331 aa
AA seq
DB search
MVIQRYLLTYMVVVLASYLHNLIRAIEVPRDPSIQDTLPQPPTITKQSAKDYIVDPRDDI
LIECEAKGNPTPTFSWTRNGKFFNVAKDPRVTMKHWSGTLIVDFRSGGRPEDYEGEYQCF
ARNDYGTAISNKIFLHVSKSPLWPKENLDIQEVHEGASLILACNPPPGLPPPAIFWMSSS
MEPIHQDKRVSQGQNGDLYFSNVMQQDALTDYSCNARFAFTHTIQQKNPYTLKIITTRGI
AERQPSFMYPIGTSSSQMVLRGEDLLLECIASGVPSPDIMWHKKGGDLPSGRIKLENFNK
ALHIANISEEDSGEYFCLASNKVGISRHSILVKVKASPYWLDEPENLILAPGEDGRLLCR
ANGNPKPSIQWLVNGELLESSAPNPSREVNGDTVMFRDIQSGSSGVYQCNASNEHGYLLA
NAFVSVLDIVPRILVPRNQLIKVIQNNRTLLDCPFFGSPIPTLRWFKNGQGSTLHGGNYK
AHENGTLEIIRARKEDQGTYTCVATNLLGKAQNQVRLEIKDPTRIIEGPKDAIPKKGSTI
HLVCQTRHDATLRLTVTWLKDDIPIYYGNRMKKEEDGLTIHGVSEKDQGYYTCVASTELD
KDTARAHVTVLAPSSVNRMTPPPARPERPRDLELTDLAERSVRLTWIPGDDNNSPITDYI
VEFEEDKFQPGTWHNHSRYPGNVNSAFLRLAPYVNYQFRVIAVNDVGSSYPSLPSERYHT
NGARPEFNPSGVKGSGTAKNNMVISWMPLNATQVYGPNLKYIVKWRRRDTRESWNNRTVK
GDVSQYTVAPTPIYTPYEIKVQALNDYGIATEPDIVIGYSGEDYPKAAPTDIRLKVVNST
AISLQWSKVYPETIQGQLKEYRAYYWRESSLLKNLWVSKKKQSLGFIGDRNRGIVSRLFP
YSNYKLEMVVVNGRGDGPRSEILEFTTPEGVPSAPRYFRIRQPNLEAVTLEWEHPEHPNG
ILIGYTLRYQAFNGSKTGRTMVEVFSPNHTKFLLQRTDPISRYRFNLRGRTQIGEGEPAT
GDSPIPLNEVLPTSDVPTVAATTISETTVPTTITEVVTTTTEVITTTTTEAVTTTTEAAT
TTEPAIITTLVASTIADVGKLPPIWNVKISSNNNWANITWNHAFDADTEFVVEYSNSNKS
VKSSPAKGFLELSDLIPGEKYIVRVFLKGNESVFSSETFHTSPAYTKNQGDIATQGWFIG
LMCAIALLVLILLIVCFIKRSRGGKYPVRANKDVPLDPDDQKVDNGSFDYRSLESDEDNK
PLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKDETEGNESSEA
TSPVNAIYSLA
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggtaattcaaaggtatctcctaacctatatggtcgtggtgctcgcttcatatcttcat
aacctcatcagagccattgaagtcccacgggatccaagtattcaagatacattgcctcag
cctcctacaattacaaagcagtctgcaaaggattatattgtagatccaagagatgatata
ttaattgagtgtgaagcgaaaggcaaccccacacccacgttttcctggacacgaaatgga
aagttttttaatgttgcaaaggacccgcgagtaaccatgaagcattggtcaggtacactg
atagttgacttccgcagtggtgggaggccagaggattatgagggagaatatcagtgtttt
gctcggaatgactacggaacagctatttccaacaaaatattcctccatgtttcaaaatct
cctttgtggccaaaggaaaatttggacattcaagaggttcacgaaggtgcttcacttatc
ttggcatgcaatcctccacctggactaccaccccctgctatcttttggatgagtagctcc
atggaaccaatccatcaagacaagcgtgtctctcaagggcagaatggtgacttgtatttc
tctaatgtcatgcagcaggatgctctgactgactatagctgcaatgctcgctttgctttc
acacataccatccagcagaaaaatccttacaccctcaaaatcataaccacccgaggtatt
gcagaaaggcaacccagcttcatgtaccctattgggacctcaagcagtcagatggtgcta
agaggagaagacctcttgctggaatgcattgcctcaggagttccatcaccagatatcatg
tggcacaaaaagggtggtgatctcccatctggcaggatcaagttggaaaactttaacaag
gctcttcatattgcaaatatttctgaggaagattctggggaatatttctgcttagcttcc
aacaaagtgggcattagccgccatagtatcttggtgaaagtgaaagcttccccatattgg
ttggatgaaccagagaaccttattttggctcctggtgaagatggaagactgctgtgccgt
gccaatggtaaccccaaaccttcaatccagtggcttgtgaatggagaacttctagaaagt
tctgctcccaatcccagccgtgaagttaatggagacactgttatgtttcgggacatccag
agtggcagcagtggtgtatatcaatgcaacgcttctaatgaacatgggtacctgttagcc
aatgcatttgttagtgtgttggatattgttcctcggatccttgtccctcgtaatcagctg
ataaaagttattcagaataatcggactcttcttgactgtccattctttggatccccaatt
ccaacattacgatggtttaagaacggccagggaagtacattgcatggtggcaattataaa
gcacatgagaatggaactttagaaatcattagagctcggaaagaagaccagggaacttac
acctgtgtggctaccaatcttttgggcaaagcacagaaccaggttcgtttggaaataaaa
gatcccacaaggattatagagggacccaaagatgctataccaaagaaaggttccacaatt
cacttagtgtgccagacaagacatgatgccacattacggcttacagttacctggcttaaa
gatgatattcccatctactatggaaacaggatgaagaaagaagaagatggtttgactata
catggagtatcagaaaaagatcaaggatattatacctgtgtggctagcactgaactagat
aaggatactgccagagcccatgtcactgtacttgctccttcttctgttaaccgtatgacc
ccacccccagcacgtccagaacgtccccgcgaccttgaactaacagaccttgctgaaagg
agtgtgcggttaacttggattcctggtgatgacaacaacagcccaatcacggattatatt
gtggaatttgaggaggataaattccaacctggaacttggcataaccattcccgctaccca
ggaaatgtgaactccgccttcttgcgccttgcaccatatgtcaactatcagttccgagta
atagctgtgaatgatgtaggaagcagttatcccagtctgccttctgaacgataccataca
aatggggcacgccccgaatttaacccttcaggagttaaaggatcaggaacagcaaaaaat
aatatggttatatcatggatgccattaaatgcaactcaagtgtatggccccaatcttaaa
tacattgtgaagtggagaagaagggacacacgggagagttggaacaaccgaactgtaaag
ggtgatgtcagtcagtatactgtcgcaccaacacctatctatacaccatacgagatcaaa
gtacaagctttaaatgattatgggattgccacggagccagacatcgtaattggctactca
ggggaagattatcctaaggctgcccctactgatattaggctcaaagttgtaaacagtaca
gcaatcagccttcaatggagtaaagtgtacccagaaaccatccagggacagctcaaggaa
tatagagcttattactggagagaaagtagtttgctgaagaatctatgggtctctaagaaa
aagcagtcattgggttttattggagaccggaatcggggcatagtgtcccggctgtttcct
tacagcaactacaaattggaaatggttgtagtcaacgggagaggagacgggcctcggagt
gaaattctggaattcacaacacctgaaggagtgcccagtgccccaaggtatttccgaatt
cgtcagccaaacttggaggccgtcaccttggagtgggaacatcctgaacatcccaatggc
attcttattggatacacccttagataccaagcctttaacggatccaaaactggcagaaca
atggtagaggtcttctctcctaatcacacaaagtttttacttcagaggacggatcctatc
tcacgctacaggttcaatctacgtggcaggacccagattggagaaggtgagcctgccaca
ggggactctccaattccactgaatgaagttcttccaacctcagatgttccaactgtggct
gcaaccaccatttcagaaactactgtcccaaccaccattaccgaagttgtaaccaccacc
acagaagttataaccactaccaccacagaagctgtaaccaccaccacagaagctgcaacc
actacagagccagcaatcatcaccacacttgttgctagtacaatagctgatgttggaaag
ctgccgcccatctggaatgtaaaaatttcatctaacaataactgggcaaatatcacctgg
aaccacgcatttgatgctgacactgaatttgtggttgagtatagcaacagtaacaaatca
gtgaaatcttcccctgctaaaggttttctggagctgagtgatctgattcctggtgagaag
tatatagtacgggtttttctcaaaggcaatgagtctgtcttctcaagtgaaacctttcac
acaagtccagcctatactaagaatcaaggggacattgcaactcagggctggtttattgga
ttgatgtgtgccatcgctctcctggtcctgattttgctgatagtttgctttattaagagg
agcagaggaggaaaatatccagtgcgagcaaataaagatgtgcccctcgatcctgatgat
cagaaggtagataatggatcgttcgattacaggtctcttgaaagtgatgaagacaacaag
ccactgcaaggcagtcagacctccttagatggcacaataaaacaacaagaaagtgatgac
agcttggtggactatggagaaggaggtgaaggacagttcaatgaagatggttcctttatt
ggccagtacacagttaagaaggacaaagatgagacagaaggcaatgagagctcagaagcc
acatcaccagtaaatgctatctattccctggcataa
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