Thamnophis sirtalis (common garter snake): 106553739
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Entry
106553739 CDS
T06107
Name
(RefSeq) claudin-3-like
KO
K06087
claudin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03272
Virion - Hepatitis viruses
tsr04382
Cornified envelope formation
tsr04514
Cell adhesion molecule (CAM) interaction
tsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
106553739
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
106553739
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106553739
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106553739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tsr03037
]
106553739
04147 Exosome [BR:
tsr04147
]
106553739
Cilium and associated proteins [BR:
tsr03037
]
Other cilia and associated proteins
Stereociliary proteins
106553739
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
106553739
Exosomal proteins of colorectal cancer cells
106553739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM_230_134
Clc-like
DUF1129
DUF6131
CdpA_N
Motif
Other DBs
NCBI-GeneID:
106553739
NCBI-ProteinID:
XP_013927776
UniProt:
A0A6I9YUT5
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MSMGLEIGGVALSVIGVIGTILCCGLPMWKVTAFIGYNIVTAQFTGEGLWMNCVTQSTGQ
MQCKVYDSMLALSPDLQAARALIVIAIVLGVMGILIFLMGAQCTRCIEDESTKAKVTITS
GVIFLLAGLLTLIPVCWTANQIIRDFYNVGVPDYLKREIGPSLYIGWAAAALFLFGGSLL
CCSCPPKEEKYRPTTMAYSAPRSTAMSYDKKNYV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgggtttggagattggcggcgtagccctgtctgtcataggtgtgataggcacc
atcttgtgttgcgggttgcctatgtggaaagtgactgctttcattggctacaacatcgtc
actgcgcagttcaccggggaagggctatggatgaactgtgtgactcagagtaccggccag
atgcaatgcaaggtctatgattccatgctggcattgtcaccggacctacaggctgctcgg
gccttaatcgtcattgccattgtccttggggtgatggggatcctcattttcctgatggga
gcacagtgcactcgctgcattgaagatgaatctacaaaggccaaggtcaccatcacttct
ggggtcatcttcctgctggcaggcctcctgactctcatccccgtctgctggactgccaat
caaattatccgcgatttctacaatgtaggagtcccagattacctgaaacgtgaaatagga
ccttcactctacattggttgggcagcagcagcccttttccttttcggaggaagcttgctc
tgctgttcctgcccccccaaggaggagaagtacagacccacaaccatggcctactctgca
cccaggtctactgcgatgagctacgacaagaagaattacgtatga
DBGET
integrated database retrieval system
